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Protein Overview: TIR3

General Information:
Name(s) found: TIR3 / YIL011W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Cell wall mannoprotein of the Srp1p/Tip1p family of serine-alanine-rich proteins; expressed under anaerobic conditions and required for anaerobic growth [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: fungal-type cell wall [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTKIAALL AVAAASTQLV SAEVGQYEIV EFDAILADVK ANLEQYMSLA MNNPDFTLPS  60
   61 GVLDVYQHMT TATDDSYTSY FTEMDFAQIT TAMVQVPWYS SRLEPEIIAA LQSAGISITS 120
  121 LGQTVSESGS ESATASSDAS SASESSSAAS SSASESSSAA SSSASESSSA ASSSASESSS 180
  181 AASSSASEAA KSSSSAKSSG SSAASSAASS ASSKASSAAS SSAKASSSAE KSTNSSSSAT 240
  241 SKNAGAAMDM GFFSAGVGAA IAGAAAMLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] Pfam 63.49485 Seripauperin and TIP1 family Confident ab initio structure predictions are available.
    2 View Details [111..269] PSI-BLAST 3.69897 Fibrinogen


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle