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Protein Overview: URM1

General Information:
Name(s) found: URM1 / YIL008W [SGD]
Description(s) found:
Found 33 descriptions.
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  • Ubiquitin-like protein with weak sequence similarity to ubiquitin; depends on the E1-like activating enzyme Uba4p; molecular function of the Urm1p pathway is unknown, but it is required for normal growth, particularly at high temperature [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 99 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    Biological Process: response to oxidative stress [IMPLink to PubMed article]
    response to drug [IMPLink to PubMed article]
    cell budding [IGILink to PubMed article]
    invasive growth in response to glucose limitation [IGILink to PubMed article][IMPLink to PubMed article]
    protein urmylation [IDALink to PubMed article]
    Molecular Function: protein tag [IDALink to PubMed articleLink to PubMed article][IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNVKVEFLG GLDAIFGKQR VHKIKMDKED PVTVGDLIDH IVSTMINNPN DVSIFIEDDS  60
   61 IRPGIITLIN DTDWELEGEK DYILEDGDII SFTSTLHGG

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. CDD1 SUS1 URM1 gi|14277743, gi|... gi|157829936, gi... gi|1942461, gi|1... gi|218766672 gi|66360422, gi|... gi|88192563, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen GBP2 URM1 1 Unpublished Fields Lab Data
    View Screen RAD51 URM1 1 Unpublished Fields Lab Data
    View Screen VAM7 URM1 1 Unpublished Fields Lab Data
    View Screen CCE1 URM1 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data URM1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] PSI-BLAST 37.0 No description for 2qjlA was found.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle