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Protein Overview: YGR251W

General Information:
Name(s) found: YGR251W [SGD]
Description(s) found:
Found 28 descriptions.
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  • Essential protein required for maturation of 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the nucleolus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    nuclear outer membrane [IMPLink to PubMed article]
    nucleolus [IDALink to PubMed articleLink to PubMed article]
    Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRAKELQEK LNLQAKLQST FSNNTAAVLD WLKESDETGI SNDTERNKQL KDHKELEDGK  60
   61 KAFFKLPVLQ IGSGLHFRTQ DDASAKEDIH TIGEFIEGDK KVSSLAKKKK RSDPGLQRNN 120
  121 MYRITKDDTK AMIALKRKMR KGEKEGLRKK QEHSKSSVSN SYSASDEEDE DAGTMPQKST 180
  181 KKKFGLLFDK KKKARK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) DHR2 IFH1 RRP7 TDA7 UBP10 UTP22 YGR251W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YGR251W and SPC42 Hazbun TR, et al. (2003)
    View Data YGR251W and NOP56 Huh WK, et al. (2003)
    View Data YGR251W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle