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Protein Overview: YGR042W

General Information:
Name(s) found: YGR042W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Putative protein of unknown function; involved in maintenance of proper telomere length; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: telomere maintenance [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSHIVEYEC QYTDQLYKKR KIWHDGRLKY FQLNNRFMLY TEKDNVLLAS EFKINSKELK  60
   61 AILNPEGFDI EEHRIFSQFL VIISNIIEEY DRDIQVAATH VRAYPSNLSV QKQRPLISDN 120
  121 APSLNHISTA REVHSNIKVT TPNRKQTEDN ATKGGFNISK LTLKVNKPFK KPKRILSTNV 180
  181 VNESNRPSIR SQKIQEVTPQ LHETNTSTKV QTAGKVALNN DNIAQGNYAT ITEEAKVRDG 240
  241 SDRKKDMANL SKSGKRRVGG IRRIVHEPLG I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PRP42 YGR042W 1 Unpublished Fields Lab Data
    View Screen LIA1 YGR042W 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YGR042W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle