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Protein Overview: RMD9

General Information:
Name(s) found: RMD9 / YGL107C [SGD]
Description(s) found:
Found 28 descriptions.
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  • Mitochondrial protein required for respiratory growth; mutant phenotype and genetic interactions suggest a role in delivering mt mRNAs to ribosomes; located on matrix face of the inner membrane and loosely associated with mitoribosomes [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 646 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRRNAVRS LKTMEISVSN VVNSGSIAML RGKLANVVLS DRTYHSSPIF HKNVPKGVLD  60
   61 KKNGREQRKT EQNVFNVDPA SPWRHELLSF DECVSSALKY STTPLQNTYK RIGNNQLNKN 120
  121 PSFAMFWDSM GRAMELYYSL RESPDFNAYR VSRLIHLLHN GLRSTRDQLV KLSRKPDYDS 180
  181 QSFHKEMMNF LCNSLKDISD DILIGKVSVS GYGATHLLTS FKELSFDDDC IRIWEASKNL 240
  241 SDETTSQAFQ EPKVVGFMLP LLYAKTRSLT EPNELYNQII QSKEFIHPNL YSGLIKVFIK 300
  301 AEDYEKALSL FGQLCEKAEV RNYGYLIETH LSFIGDSKNL TLAESFFDKI INDEMPYKII 360
  361 LQVSTVNSFL QNIWKAQNDF DHVYRIWEKA VKFYGNTVNP GILSSLNNTF FTIFFENYIN 420
  421 DNINGFRKLQ EIITFYSGVK KIDEPFFNVM LTRASIWHER SIIDFIDKNY TLYHIPRTII 480
  481 SYRILLKSLG SIDNTNNEEI LDRWLELVKK LNELGQQYIA NADLSALRDA TVVWSQSKRD 540
  541 EKVFSAKAKG TPATTTTTED DIKVPKPLEN LKNEDSTSNS EDRIELYLKI LKRYTPYFRA 600
  601 TKQVYRYTTG CAESYPILNE YLSGYSDLSA EDIPVPQLHS FIAKEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data RMD9 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] deduced N/A No confident structure predictions are available.
    2 View Details [125..395] ab initio 7.06 No description for 1qoyA was found.
    3 View Details [396..646] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle