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Protein Overview: STB3

General Information:
Name(s) found: STB3 / YDR169C [SGD]
Description(s) found:
Found 29 descriptions.
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  • Ribosomal RNA processing element (RRPE)-binding protein involved in the induction of non-ribosomal protein growth genes by glucose; binds Sin3p in a two-hybrid assay [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENQKEVSP PQAISVKSEA SSSIFSKPIS TSSPAGLAAA QRVTPGKLST LLLEMGPLAI  60
   61 RHITQTLCLD IPCFKDLSSS KQRRLIMSAM ESGDKEKSVV FEKIGWGQWS AKRVDPANFD 120
  121 KELEATNFAN AKVKDLISQE SQRRKSNNSN SNSGGKVEMP MKVEHNITNI DGATTPPTAV 180
  181 ASTTIPVNIK RSKSPLAAAN VVYIDENALA SEDEDEEFDE DDHHLHYQNK SRNSSNNFGK 240
  241 SSNGDPYSFG RRRSQVVFAD STPENIEHEI IAQKIRPLLR NRRRSSIKPH TPFISKLNTH 300
  301 QDSSYLSPNT TSTTTPSNNN SNSNQAKIDL EKLTATSEPT SRRASRLSVS KESSIRSTLF 360
  361 PNKNYLIVTT NPNSKATSVS TSPKLEEQMN VSSNPIVLSD KEKHRVASQH LNGESSPQLV 420
  421 PHSHHQPHSD TDEEDWESIG AASLRNNSLA PNIDSVASST NGVVSPKPTN PSFTNSQNGD 480
  481 IEPPLQHDQQ KHEQQPRNGE DNSAAFLLMS LKS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) STB3 TRP2 TRP3
    View Details Ho Y, et al. (2002) CTK3 RVB1 STB3 UBA1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data STB3 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] MSA 1.002968 View MSA. No confident structure predictions are available.
    2 View Details [119..513] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle