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Protein Overview: YDR018C

General Information:
Name(s) found: YDR018C [SGD]
Description(s) found:
Found 31 descriptions.
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  • Probable membrane protein with three predicted transmembrane domains; homologous to Ybr042cp, similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: phospholipid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: acyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHSQKYRRY GIYEKTGNPF IKGLQRLLIA CLFISGSLSI VVFQICLQVL LPWSKIRFQN  60
   61 GINQSKKAFI VLLCMILNMV APSSLNVTFE TSRPLKNSSN AKPCFRFKDR AIIIANHQMY 120
  121 ADWIYLWWLS FVSNLGGNVY IILKKALQYI PLLGFGMRNF KFIFLSRNWQ KDEKALTNSL 180
  181 VSMDLNARCK GPLTNYKSCY SKTNESIAAY NLIMFPEGTN LSLKTREKSE AFCQRAHLDH 240
  241 VQLRHLLLPH SKGLKFAVEK LAPSLDAIYD VTIGYSPALR TEYVGTKFTL KKIFLMGVYP 300
  301 EKVDFYIREF RVNEIPLQDD EVFFNWLLGV WKEKDQLLED YYNTGQFKSN AKNDNQSIVV 360
  361 TTQTTGFQHE TLTPRILSYY GFFAFLILVF VMKKNH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ARF2 COX2 MMF1 SLN1 YDR018C YDR374C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [103..247] PSI-BLAST 2.221849 Glycerol-3-phosphate (1)-acyltransferase
    3 View Details [248..396] MSA 1.122982 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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