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Protein Overview: LDB17

General Information:
Name(s) found: LDB17 / YDL146W [SGD]
Description(s) found:
Found 28 descriptions.
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  • Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: cellular bud [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cellular bud neck [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILDPLSPNI ENHTQDEIIE FWEKTESIAN IPKENLDESH VNSSLVAYLK FATDSYKVFI  60
   61 NTDRDLYRMS LILLESSLFE FKKEFCLSKL QSLLNIDLLE MNMKFIIVYI LLCEAKKNVY 120
  121 SLEIMLKFQG FTVFYNTLYT QFAYLSKYGK ERTVASKHQY NSNNSSTGTS LDSLDRSLTD 180
  181 IDLGIIDEMK QISTVLMDLL FQIMKYCKCV IANLQIVDDF FVYYMMESMR SDTMDDMFNN 240
  241 AEFKLLLALN EQYMMFAKEY DIENKVYKYL INGSVSRCFT ELLLLKFNRA SDPPLQIMMC 300
  301 KIIYLILTPR GDYSPMNFFY TNDLRVLIDV LIRELQNISE DEEVLRNTLL RVLIPLLKNT 360
  361 QLSKTHYRKD DLNKLLNYLS TLDNICVDSP ALHEHQVTVA LSRKCLQQIP WLETPSTPSD 420
  421 GGSSVSSNNT SRNSSIVALG TPDNQNILAR KGHLYSNREL DVSAESLTKR KAKAPPPPPP 480
  481 PPPSRKCGTP K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data LDB17 Huh WK, et al. (2003)
    View Data LDB17 Huh WK, et al. (2003)
    View Data LDB17 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] deduced N/A No confident structure predictions are available.
    2 View Details [165..415] MSA 3.007961 View MSA. No confident structure predictions are available.
    3 View Details [416..491] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle