| Protein: | LDB17 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 491 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LDB17.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..491] | [1..491] |
|
|
0.0 | [9..413] | [9..364] |
|
|
0.0 | [70..413] | [1..303] |
|
|
7.0E-57 | [221..389] | [620..783] |
|
|
1.0E-54 | [221..383] | [526..687] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MILDPLSPNI ENHTQDEIIE FWEKTESIAN IPKENLDESH VNSSLVAYLK FATDSYKVFI 60
61 NTDRDLYRMS LILLESSLFE FKKEFCLSKL QSLLNIDLLE MNMKFIIVYI LLCEAKKNVY 120
121 SLEIMLKFQG FTVFYNTLYT QFAYLSKYGK ERTVASKHQY NSNN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-415] |
1 11 21 31 41 51
| | | | | |
1 SSTGTSLDSL DRSLTDIDLG IIDEMKQIST VLMDLLFQIM KYCKCVIANL QIVDDFFVYY 60
61 MMESMRSDTM DDMFNNAEFK LLLALNEQYM MFAKEYDIEN KVYKYLINGS VSRCFTELLL 120
121 LKFNRASDPP LQIMMCKIIY LILTPRGDYS PMNFFYTNDL RVLIDVLIRE LQNISEDEEV 180
181 LRNTLLRVLI PLLKNTQLSK THYRKDDLNK LLNYLSTLDN ICVDSPALHE HQVTVALSRK 240
241 CLQQIPWLET P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [416-491] |
1 11 21 31 41 51
| | | | | |
1 STPSDGGSSV SSNNTSRNSS IVALGTPDNQ NILARKGHLY SNRELDVSAE SLTKRKAKAP 60
61 PPPPPPPPSR KCGTPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
