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Protein Overview: gi|113194676, gi...

General Information:
Name(s) found: gi|71835488 [NCBI NR]
gi|116007740 [NCBI NR]
gi|113194676 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|71835488|gb|AAZ42161.1| oncogene yorkie [Drosophila melanogaster] [NCBI NR]
  • gi|116007740|ref|NP_001036568.1| yorkie CG4005-PC, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|113194676|gb|ABI31113.1| CG4005-PC, isoform C [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell proliferation [IMP]
    negative regulation of apoptosis [IMP]
    morphogenesis of an epithelial sheet [IMP]
    regulation of growth [IMP]
    regulation of rhodopsin gene expression [NAS]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    protein binding [IEA]
    transcription coactivator activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCACLIAKII LCSFRLYTIS AFYMLTTMSA SSNTNSLIEK EIDDEDMLSP IKSNNLVVRV  60
   61 NQDTDDNLQA LFDSVLNPGD AKRPLQLPLR MRKLPNSFFT PPAPSHSRAN SADSTYDAGS 120
  121 QSSINIGNKA SIVQQPDGQS PIAAIPQLQI QPSPQHSRLA IHHSRARSSP ASLQQNYNVR 180
  181 ARSDAAAANN PNANPSSQQQ PAGPTFPENS AQEFPSGAPA SSAIDLDAMN TCMSQDIPMS 240
  241 MQTVHKKQRS YDVISPIQLN RQLGALPPGW EQAKTNDGQI YYLNHTTKST QWEDPRIQYR 300
  301 QQQQILMAER IKQNDVLQTT KQTTTSTIAN NLGPLPDGWE QAVTESGDLY FINHIDRTTS 360
  361 WNDPRMQSGL SVLDCPDNLV SSLQIEDNLC SNLFNDAQAI VNPPSSHKPD DLEWYKIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] MSA 3.208996 View MSA. No confident structure predictions are available.
    2 View Details [198..330] FFAS03 2.41 Splicing factor prp40
    3 View Details [331..418] PSI-BLAST 15.522879 NMR structure of WW domains (WW3-4) from Suppressor of Deltex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.22107891661937 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.15713675708979 bayes_pls_golite062009
  • protein binding
    		•  0.651765243224234 bayes_pls_golite062009
  • catalytic activity
    		•  0.601784505590861 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0452587090203611 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  1.28256682962994 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.24334238369909 bayes_pls_golite062009
  • protein binding
    		•  0.750551821210286 bayes_pls_golite062009
  • catalytic activity
    		•  0.581152441703125 bayes_pls_golite062009
  • transcription activator activity
    		•  0.27562799136895 bayes_pls_golite062009
  • transcription factor binding
    		•  0.21378499004769 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.10815300336376 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.36

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle