| Protein: | gi|113194676, gi... |
| Organism: | Drosophila melanogaster |
| Length: | 418 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113194676, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..63] | [407..155] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MCACLIAKII LCSFRLYTIS AFYMLTTMSA SSNTNSLIEK EIDDEDMLSP IKSNNLVVRV 60
61 NQDTDDNLQA LFDSVLNPGD AKRPLQLPLR MRKLPNSFFT PPAPSHSRAN SADSTYDAGS 120
121 QSSINIGNKA SIVQQPDGQS PIAAIPQLQI QPSPQHSRLA IHHSRARSSP ASLQQNYNVR 180
181 ARSDAAAANN PNANPSS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [198-330] |
1 11 21 31 41 51
| | | | | |
1 QQQPAGPTFP ENSAQEFPSG APASSAIDLD AMNTCMSQDI PMSMQTVHKK QRSYDVISPI 60
61 QLNRQLGALP PGWEQAKTND GQIYYLNHTT KSTQWEDPRI QYRQQQQILM AERIKQNDVL 120
121 QTTKQTTTST IAN
|
| Detection Method: | |
| Confidence: | 2.41 |
| Match: | 1o6wA |
| Description: | Splicing factor prp40 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.22107891661937 | bayes_pls_golite062009 |
| transcription regulator activity | 1.15713675708979 | bayes_pls_golite062009 |
| protein binding | 0.651765243224234 | bayes_pls_golite062009 |
| catalytic activity | 0.601784505590861 | bayes_pls_golite062009 |
| transcription activator activity | 0.0452587090203611 | bayes_pls_golite062009 |
|
Region A: Residues: [331-418] |
1 11 21 31 41 51
| | | | | |
1 NLGPLPDGWE QAVTESGDLY FINHIDRTTS WNDPRMQSGL SVLDCPDNLV SSLQIEDNLC 60
61 SNLFNDAQAI VNPPSSHKPD DLEWYKIN
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1tk7A |
| Description: | NMR structure of WW domains (WW3-4) from Suppressor of Deltex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.28256682962994 | bayes_pls_golite062009 |
| transcription regulator activity | 1.24334238369909 | bayes_pls_golite062009 |
| protein binding | 0.750551821210286 | bayes_pls_golite062009 |
| catalytic activity | 0.581152441703125 | bayes_pls_golite062009 |
| transcription activator activity | 0.27562799136895 | bayes_pls_golite062009 |
| transcription factor binding | 0.21378499004769 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.10815300336376 | bayes_pls_golite062009 |
