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Protein Overview: lfi-1

General Information:
Name(s) found: lfi-1 / CE38923 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00022500 locus:lfi-1 status:Confirmed UniProt:H2L0I4 protein_id:CCD73132.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][IEALink to PubMed article]
    kinetochore microtubule [IDALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: viral reproduction [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFSCGVNSS SPGRQLVVSE SVSEDNLHNP SSHALRTLSP VSPPTANSSS STSRSCSPVV  60
   61 RAETIVAGKW THISGKVSVR PLTPSETESV LDRQRQKNRR SSRKDKLKMS THDDTRSSGG 120
  121 GDGTIHIPSA DAKEPTPESP GSRSNYGEFY WDTSGENNYH HTSSFDDDLL LEIDSSRGAA 180
  181 VARLDRTQDD LNKFRQRIDN NVEQQREYSE MMAALQNKVH EYRKHIAELE GRMVGARNRM 240
  241 LDDPTSNVMI FDNYDPGNTY ITNHNVELWS PARGKRETIL GGGGAPGLTT VNVHAGAGYS 300
  301 GSGVAGYGGG VQAMVGDPNA NYEMIARLDE ERRRSDEYRM QWENERQKSL SLEDENDRLR 360
  361 REFERYANDS NL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] deduced N/A No confident structure predictions are available.
    2 View Details [167..372] PSI-BLAST 11.09691 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle