| Protein: | lfi-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lfi-1.
| Description | E-value | Query Range |
Subject Range |
|
|
304.0 | [0..1] | [370..1] |
|
Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MFFSCGVNSS SPGRQLVVSE SVSEDNLHNP SSHALRTLSP VSPPTANSSS STSRSCSPVV 60
61 RAETIVAGKW THISGKVSVR PLTPSETESV LDRQRQKNRR SSRKDKLKMS THDDTRSSGG 120
121 GDGTIHIPSA DAKEPTPESP GSRSNYGEFY WDTSGENNYH HTSSFD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [167-372] |
1 11 21 31 41 51
| | | | | |
1 DDLLLEIDSS RGAAVARLDR TQDDLNKFRQ RIDNNVEQQR EYSEMMAALQ NKVHEYRKHI 60
61 AELEGRMVGA RNRMLDDPTS NVMIFDNYDP GNTYITNHNV ELWSPARGKR ETILGGGGAP 120
121 GLTTVNVHAG AGYSGSGVAG YGGGVQAMVG DPNANYEMIA RLDEERRRSD EYRMQWENER 180
181 QKSLSLEDEN DRLRREFERY ANDSNL
|
| Detection Method: | |
| Confidence: | 11.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
