Protein: | lfi-1 |
Organism: | Caenorhabditis elegans |
Length: | 372 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lfi-1.
Description | E-value | Query Range |
Subject Range |
|
304.0 | [0..1] | [370..1] |
Region A: Residues: [1-166] |
1 11 21 31 41 51 | | | | | | 1 MFFSCGVNSS SPGRQLVVSE SVSEDNLHNP SSHALRTLSP VSPPTANSSS STSRSCSPVV 60 61 RAETIVAGKW THISGKVSVR PLTPSETESV LDRQRQKNRR SSRKDKLKMS THDDTRSSGG 120 121 GDGTIHIPSA DAKEPTPESP GSRSNYGEFY WDTSGENNYH HTSSFD |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [167-372] |
1 11 21 31 41 51 | | | | | | 1 DDLLLEIDSS RGAAVARLDR TQDDLNKFRQ RIDNNVEQQR EYSEMMAALQ NKVHEYRKHI 60 61 AELEGRMVGA RNRMLDDPTS NVMIFDNYDP GNTYITNHNV ELWSPARGKR ETILGGGGAP 120 121 GLTTVNVHAG AGYSGSGVAG YGGGVQAMVG DPNANYEMIA RLDEERRRSD EYRMQWENER 180 181 QKSLSLEDEN DRLRREFERY ANDSNL |
Detection Method: | |
Confidence: | 11.09691 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |