Protein Overview: gale-1

General Information:
Name(s) found:	gale-1 / CE38295 [WormBase]
Description(s) found: Found 14 descriptions. SHOW ALL	WBGene00008132 locus:gale-1 status:Confirmed UniProt:Q564Q1 protein_id:CAI79146.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	349 amino acids
Gene Ontology:
Cellular Component:	intracellular [IEA]
Biological Process:	carbohydrate metabolic process [IEA] nucleotide-sugar metabolic process [IEA] extracellular polysaccharide biosynthetic process [IEA] GDP-mannose metabolic process [IEA] steroid biosynthetic process [IEA] biosynthetic process [IEA] galactose metabolic process [IEA] cellular metabolic process [IEA]
Molecular Function:	3-beta-hydroxy-delta5-steroid dehydrogenase activity [IEA] NADP or NADPH binding [IEA] coenzyme binding [IEA] catalytic activity [IEA] UDP-glucose 4-epimerase activity [IEA] steroid delta-isomerase activity [IEA] dTDP-glucose 4,6-dehydratase activity [IEA] L-aminoadipate-semialdehyde dehydrogenase activity [IEA] ADP-glyceromanno-heptose 6-epimerase activity [IEA] dTDP-4-dehydrorhamnose reductase activity [IEA] GDP-mannose 4,6-dehydratase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHILVTGAAG FIGSHTVLEL LNSGYTVLCI DNFANAISVT DEHGNAISLK RVAQLTGKDV  60
   61 PFQNVDVCDE AALEKVFSEN KFDGIIHLAA LKAVGESVAK PLQYYSNNLV ASLNLIQMCL 120
  121 KYNVKNFVFS SSATVYGPPS ELPITEKSQT GQGITNPYGQ TKYMMEQILI DVGKANPEWN 180
  181 VVLLRYFNPV GAHKSGLIGE DPKGVPNNLM PYVSQVAIGK LPVLTIYGDQ FDTVDGTGVR 240
  241 DYIHVVDLAK GHVKAFDRIK TVGNIGTEIY NLGTGVGYSV RQMVDALKKV SGRDIPVKIG 300
  301 VPRPGDVASV YCDPSLAQEK LGWRAETGLE EMCADLWNWQ TKNPQGFSA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
UDP-glucose 4-epimerase activity	2.13934644118967	bayes_pls_golite062009
catalytic activity	1.79741889688267	bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors	1.03956654822048	bayes_pls_golite062009
nucleic acid binding	0.868888700854563	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	0.82673050487418	bayes_pls_golite062009
DNA binding	0.790382977752475	bayes_pls_golite062009
binding	0.784517759335365	bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity	0.65743456407889	bayes_pls_golite062009
transcription regulator activity	0.613310508772122	bayes_pls_golite062009
retinol dehydrogenase activity	0.48941662111046	bayes_pls_golite062009
transcription factor activity	0.11102650759187	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.67

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..349]	PSI-BLAST	93.0	Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)

Protein Overview: gale-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: