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Protein Overview: ced-4

General Information:
Name(s) found: ced-4 / CE38154 [WormBase]
Description(s) found:
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  • WBGene00000418 locus:ced-4 Cell death protein 4 status:Partially_confirmed UniProt:P30429 protein_id:CCD66782.1 [WormBase]
  • gi|71982948|ref|NP_001021203.1| CEll Death abnormality family member (ced-4) [Caenorhabditis elegans] [NCBI NR]
  • gi|62297305|sp|P30429.2|CED4_CAEEL RecName: Full=Cell death protein 4 [NCBI NR]
  • gi|60543568|gb|AAX22294.1| Cell death abnormality protein 4, isoform b [Caenorhabditis elegans] [NCBI NR]
  • Cell death protein 4 OS=Caenorhabditis elegans GN=ced-4 PE=1 SV=2 [Swiss-Prot]
  • CE38154 WBGene00000418 locus:ced-4 status:Partially_confirmed TR:Q5BHI5 protein_id:AAX22294.1 [wormpep150.fasta]
  • 38154 WBGene00000418 locus:ced-4 status:Partially_confirmed TR:Q5BHI5 protein_id:AAX22294.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE38154 WBGene00000418 locus:ced-4 status:Partially_confirmed UniProt:P30429 protein_id:AAX22294.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE38154 WBGene00000418 locus:ced-4 status:Partially_confirmed UniProt:P30429 protein_id:AAX22294.1| [wormORF-contam.fasta]
  • Cell death protein 4 [nr-271106-contam.fasta]
  • CEll Death abnormality family member (ced-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cell death abnormality protein 4, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE38154 WBGene00000418 locus:ced-4 status:Partially_confirmed UniProt:P30429 protein_id:CCD66782.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE38154 WBGene00000418 locus:ced-4 status:Partially_confirmed UniProt:P30429 protein_id:CCD66782.1 Cell death protein 4 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: membrane fraction [IDALink to PubMed article]
    perinuclear region of cytoplasm [IDALink to PubMed articleLink to PubMed article]
    soluble fraction [IDALink to PubMed article]
    cytosol [IDALink to PubMed articleLink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: regulation of caspase activity [IDALink to PubMed article][IMPLink to PubMed article]
    positive regulation of apoptosis [IDALink to PubMed article][IMPLink to PubMed article]
    apoptosis [IEALink to PubMed article]
    regulation of apoptosis [IEALink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    BH3 domain binding [IPILink to PubMed article]
    ATP binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article][IPILink to PubMed articleLink to PubMed article]
    BH1 domain binding [IPILink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCEIECRAL STAHTRLIHD FEPRDALTYL EGKNIFTEDH SELISKMSTR LERIANFLRI  60
   61 YRRQASELGP LIDFFNYNNQ SHLADFLEDY IDFAINEPDL LRPVVIAPQF SRQMLDRKLL 120
  121 LGNVPKQMTC YIREYHVDRV IKKLDEMCDL DSFFLFLHGR AGSGKSVIAS QALSKSDQLI 180
  181 GINYDSIVWL KDSGTAPKST FDLFTDILLM LARVVSDTDD SHSITDFINR VLSRSEDDLL 240
  241 NFPSVEHVTS VVLKRMICNA LIDRPNTLFV FDDVVQEETI RWAQELRLRC LVTTRDVEIS 300
  301 NAASQTCEFI EVTSLEIDEC YDFLEAYGMP MPVGEKEEDV LNKTIELSSG NPATLMMFFK 360
  361 SCEPKTFEKM AQLNNKLESR GLVGVECITP YSYKSLAMAL QRCVEVLSDE DRSALAFAVV 420
  421 MPPGVDIPVK LWSCVIPVDI CSNEEEQLDD EVADRLKRLS KRGALLSGKR MPVLTFKIDH 480
  481 IIHMFLKHVV DAQTIANGIS ILEQRLLEIG NNNVSVPERH IPSHFQKFRR SSASEMYPKT 540
  541 TEETVIRPED FPKFMQLHQK FYDSLKNFAC C

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..571] PSI-BLAST 52.30103 Structure of a CED-4/CED-9 complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle