YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|16648801, gi|...

General Information:
Name(s) found: gi|30682358 [NCBI NR]
gi|22655366 [NCBI NR]
gi|16648801 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|30682358|ref|NP_850050.1| serine carboxypeptidase S28 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22655366|gb|AAM98275.1| At2g24280/F27D4.19 [Arabidopsis thaliana] [NCBI NR]
  • gi|16648801|gb|AAL25591.1| At2g24280/F27D4.19 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    lysosome [ISS]
    Biological Process: proteolysis [IEA]
    Molecular Function: serine-type peptidase activity [IEA]
    serine-type carboxypeptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACLCLVFL FFSIVAEATY SPGGFHHLSS LRLKKKVSKS KHELPFETRY FPQNLDHFSF  60
   61 TPDSYKVFHQ KYLINNRFWR KGGPIFVYTG NEGDIDWFAS NTGFMLDIAP KFRALLVFIE 120
  121 HRFYGESTPF GKKSHKSAET LGYLNSQQAL ADYAILIRSL KQNLSSEASP VVVFGGSYGG 180
  181 MLAAWFRLKY PHITIGALAS SAPILHFDNI VPLTSFYDAI SQDFKDASIN CFKVIKRSWE 240
  241 ELEAVSTMKN GLQELSKKFR TCKGLHSQYS ARDWLSGAFV YTAMVNYPTA ANFMAPLPGY 300
  301 PVEQMCKIID GFPRGSSNLD RAFAAASLYY NYSGSEKCFE MEQQTDDHGL DGWQYQACTE 360
  361 MVMPMSCSNQ SMLPPYENDS EAFQEQCMTR YGVKPRPHWI TTEFGGMRIE TVLKRFGSNI 420
  421 IFSNGMQDPW SRGGVLKNIS SSIVALVTKK GAHHADLRAA TKDDPEWLKE QRRQEVAIIE 480
  481 KWISEYYRDL REEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 50.522879 Proline iminopeptidase
    2 View Details [350..494] FFAS03 0.981 Crystal Structure Analysis of the dienelactone hydrolase (E36D, C123S) mutant- 1.5 A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  3.13500795029724 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.560001331598537 bayes_pls_golite062009
  • peptidase activity
    		•  0.49210021845334 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.204622919291197 bayes_pls_golite062009
  • structural molecule activity
    		•  0.151914509834157 bayes_pls_golite062009
  • binding
    		•  0.112743564301567 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle