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View Structure Prediction Details

Protein: gi|16648801, gi|...
Organism: Arabidopsis thaliana
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16648801, gi|....

Description E-value Query
Range
Subject
Range
gi|32967631, gi|... - gi|74147590|dbj|BAE38679.1| unnamed protein product [Mus musculus], gi|32967631|gb|AAH55022.1| Prcp ...
431.0 [0..17] [491..16]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACLCLVFL FFSIVAEATY SPGGFHHLSS LRLKKKVSKS KHELPFETRY FPQNLDHFSF  60
   61 TPDSYKVFHQ KYLINNRFWR KGGPIFVYTG NEGDIDWFAS NTGFMLDIAP KFRALLVFIE 120
  121 HRFYGESTPF GKKSHKSAET LGYLNSQQAL ADYAILIRSL KQNLSSEASP VVVFGGSYGG 180
  181 MLAAWFRLKY PHITIGALAS SAPILHFDNI VPLTSFYDAI SQDFKDASIN CFKVIKRSWE 240
  241 ELEAVSTMKN GLQELSKKFR TCKGLHSQYS ARDWLSGAFV YTAMVNYPTA ANFMAPLPGY 300
  301 PVEQMCKIID GFPRGSSNLD RAFAAASLYY NYSGSEKCFE MEQQTDDHG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.522879
Match: 1azwA
Description: Proline iminopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.13500795029724 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.560001331598537 bayes_pls_golite062009
peptidase activity 0.49210021845334 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.204622919291197 bayes_pls_golite062009
structural molecule activity 0.151914509834157 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [350-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDGWQYQACT EMVMPMSCSN QSMLPPYEND SEAFQEQCMT RYGVKPRPHW ITTEFGGMRI  60
   61 ETVLKRFGSN IIFSNGMQDP WSRGGVLKNI SSSIVALVTK KGAHHADLRA ATKDDPEWLK 120
  121 EQRRQEVAII EKWISEYYRD LREEQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.981
Match: 1zi9A
Description: Crystal Structure Analysis of the dienelactone hydrolase (E36D, C123S) mutant- 1.5 A
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle