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Protein Overview: gi|50939391, gi|...

General Information:
Name(s) found: gi|50939391 [NCBI NR]
gi|33146858 [NCBI NR]
gi|215694744 [NCBI NR]
gi|115473497 [NCBI NR]
gi|113611883 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|50939391|ref|XP_479223.1| putative GTP-binding protein DRG [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|33146858|dbj|BAC79856.1| putative GTP-binding protein DRG [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215694744|dbj|BAG89935.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115473497|ref|NP_001060347.1| Os07g0627800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113611883|dbj|BAF22261.1| Os07g0627800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVMQKIKD IEDEMARTQK NKATAHHLGL LKAKLAKLRR ELLTPTSKGG GGGAGEGFDV  60
   61 TKSGDARVGL VGFPSVGKST LLNKLTGTFS EVAAYEFTTL TCIPGVIMYK GAKIQLLDLP 120
  121 GIIEGAKDGK GRGRQVISTA RTCNVILIVL DAIKPITHKR LIEKELEGFG IRLNKTPPNL 180
  181 TFRRKDKGGI NFTSTVTNTN LDLETVKAIC SEYRIHNADV SLRYDATADD LIDVIEGSRI 240
  241 YMPCIYVVNK IDQITLEELE ILDKLPHYCP ISAHLEWNLD GLLEMIWEYL DLVRIYTKPK 300
  301 GLNPDYEDPV IVSSKKKTVE DFCNRIHKDM VKQFKYALVW GSSVKHKPQR VGKEHELEDE 360
  361 DVVQIIKKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..369] PSI-BLAST 38.221849 Crystal structure of the conserved protein TT1381 from Thermus thermophilus HB8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.09956015274464 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.09345198747025 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  1.89320355239381 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  1.88721318481223 bayes_pls_golite062009
  • GTP binding
    		•  1.87900088157196 bayes_pls_golite062009
  • DNA binding
    		•  1.87765278833074 bayes_pls_golite062009
  • GTPase activity
    		•  1.23010905798386 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.21658213854831 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.21652144153182 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.21571071905795 bayes_pls_golite062009
  • nucleotide binding
    		•  1.20347573865566 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • motor activity
    		•  0.926612891775441 bayes_pls_golite062009
  • transcription factor activity
    		•  0.682439846757997 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.498311726132348 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.219555040684154 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.198256709027213 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.197994873032963 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.089234257580272 bayes_pls_golite062009
  • helicase activity
    		•  0.0775311459068899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle