Protein Overview: tr|G3HLY6|G3HLY6...

General Information:
Name(s) found:	tr\|G3HLY6\|G3HLY6_CRIGR [CRIGR.fasta.20160308]
Description(s) found:	Vacuolar protein-sorting-associated protein 25 OS=Cricetulus griseus GN=I79_011730 PE=4 SV=1 [CRIGR.fasta.20160308]
Organism:	Cricetulus griseus
Length:	176 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMSFEWPWQ YRFPPFFTLQ PNVDTRQKQL AAWCSLVLSF CRLHKQSSMT VMEAQESPLF  60
   61 NNVKLQRKLP VESIQIVLEE LRKKGNLEWL DKNKSSFLIM WRRPEEWGKL IYQWVSRSGQ 120
  121 NNSVFTLYEL TSGEDTEDEE FHGLDEATLL RALQALQQEH KAEIITVSDG RGVKFF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..176]	PSI-BLAST	54.221849	Structure of the ESCRT-II endosomal trafficking complex

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
transcription regulator activity	3.77201910025409	bayes_pls_golite062009
binding	3.52874320222492	bayes_pls_golite062009
DNA binding	3.44642410378325	bayes_pls_golite062009
nucleic acid binding	3.38144578566524	bayes_pls_golite062009
transcription factor activity	2.83460075788873	bayes_pls_golite062009
transcription repressor activity	2.39237599101586	bayes_pls_golite062009
sequence-specific DNA binding	2.08341148210578	bayes_pls_golite062009
transcription activator activity	1.98504395280033	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.35380365970626	bayes_pls_golite062009
transferase activity	1.0863867010063	bayes_pls_golite062009
signal transducer activity	0.968719315363638	bayes_pls_golite062009
molecular transducer activity	0.968719315363638	bayes_pls_golite062009
protein binding	0.753698599635855	bayes_pls_golite062009
transcription factor binding	0.63938506997853	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.42135864069093	bayes_pls_golite062009
hydrolase activity	0.140191206949582	bayes_pls_golite062009
ubiquitin-protein ligase activity	0.136726704233672	bayes_pls_golite062009
specific transcriptional repressor activity	0.0565989703351002	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle