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Protein Overview: gi|30259287, gi|...

General Information:
Name(s) found: gi|30264629 [NCBI NR]
gi|30259287 [NCBI NR]
Description(s) found:
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  • gi|30264629|ref|NP_847006.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259287|gb|AAP28492.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • phenylalanine--tRNA ligase, beta subunit (phenylalanyl-tRNA synthetase, beta subunit) [Bacillus thuringiensis serovar konkukian str. 97-27]gi|49187450|ref|YP_030702.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. Sterne]gi|4753009 [nrdb_11152004_Chlamydomonas]
  • phenylalanyl-tRNA synthetase beta subunit [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 806 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phenylalanyl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: phenylalanine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVSYRWLQE YVDIKDVTAQ ELADKITKSG IEVEGVEVLN KGVKGVVVGH VLECEKHPEA  60
   61 DKLSKCLIDI GEEEPVQIIC GAANIAKGLK VPVAKVGAVL PGNFKIKKAK LRGEASHGMV 120
  121 CALQELGIDG KLVSKEYADG IFIFPSDAEV GADALEILNL HDEVLELGLT PNRADCLNML 180
  181 GVAYEVAAIY GREVKLPAID LQETAEKTSD YISVSVEAKE ENPLYIAKMV KNVKIGPSPM 240
  241 WMQTRLMAAG IRPISNVVDI TNYILMEYGQ PLHAFDYDKL GSKEIVVRLA KEGEKIETLD 300
  301 DQERTLQSHH LVITNGTKAL AVAGVMGGAD SEVTNETVNV LIESAYFAGQ TVRRTSKDLG 360
  361 LRSESSARFE KGIDPTRTFE AIQHAAALMA KYAGGEALEG VVEADNLQVQ ERTVSVTAEK 420
  421 VNRVLGTNIS ASEMGTMFTN LKFPFTEVEG TFHVNVPARR PDITISEDLV EEVGRLYGYD 480
  481 HIPVTLPSGT MTRGKLTAAQ TKRRKVRRFL EGAGLYEAIT YSLTSADKAK QYMVEPNEKA 540
  541 PVNLALPMSE ERSQLRLSLV PQLLEAVSYN VARKNDSVAL YEVGSIFLPT EAGELPKEEQ 600
  601 HLAGVMTGLA LHHAWQGEKK VVDFFVVKGV LEGLFDVLGV SNQITYAPAK REGMHPGRTA 660
  661 DIVLDGEVIG FIGQLHPEAE KQLDVKNTFV FELSLVKVFG TDAEETYYSA IPRFPSMTRD 720
  721 MAVVVTKETK AGEMKQVIAE AGGELLKDVT LFDLYEGEKM EEGKKSLAFS MNYFDPERTL 780
  781 TDEEVTEAHN RVLTAVEEKF GAELRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..806] PSI-BLAST 177.0 Domains B1 and B5 of PheRS-beta, PheT; Domain B2 of PheRS-beta, PheT; Phenylalanyl-tRNA synthetase; Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain; B3/B4 domain of PheRS, PheT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phenylalanine-tRNA ligase activity
    		•  13.8919118344182 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  8.21379103874748 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  8.21379103874748 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  8.20292704456024 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.90150581291897 bayes_pls_golite062009
  • glycine-tRNA ligase activity
    		•  2.61548498770105 bayes_pls_golite062009
  • ligase activity
    		•  2.56279938346489 bayes_pls_golite062009
  • structural molecule activity
    		•  2.54582212334303 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.40504745115911 bayes_pls_golite062009
  • threonine-tRNA ligase activity
    		•  2.18642354927 bayes_pls_golite062009
  • serine-tRNA ligase activity
    		•  2.07594942154162 bayes_pls_golite062009
  • alanine-tRNA ligase activity
    		•  1.82594054955281 bayes_pls_golite062009
  • lysine-tRNA ligase activity
    		•  1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
    		•  1.72215103383322 bayes_pls_golite062009
  • binding
    		•  1.60192408330567 bayes_pls_golite062009
  • DNA binding
    		•  1.60160949474354 bayes_pls_golite062009
  • translation regulator activity
    		•  1.46320772716954 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.40718318783582 bayes_pls_golite062009
  • translation initiation factor activity
    		•  1.27539679024898 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
    		•  0.921774798819338 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
    		•  0.921492123574877 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.506819168662173 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.440010017405756 bayes_pls_golite062009
  • nuclease activity
    		•  0.29926900436997 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.19668406318255 bayes_pls_golite062009
  • RNA binding
    		•  0.17671444859699 bayes_pls_golite062009
  • protein binding
    		•  0.175576548546361 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle