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Protein Overview: gi|30264394, gi|...

General Information:
Name(s) found: gi|30264394 [NCBI NR]
gi|30259052 [NCBI NR]
Description(s) found:
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  • gi|30264394|ref|NP_846771.1| DNA polymerase III subunit delta [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259052|gb|AAP28257.1| conserved hypothetical protein [Bacillus anthracis str. Ames] [NCBI NR]
  • hypothetical protein BAS4222 [Bacillus anthracis str. Sterne]gi|47529845|ref|YP_021194.1| hypothetical protein GBAA4548 [Bacillus anthracis str. 'Ames Ancestor']gi|30264394|ref|NP_846771.1| hypothetical protein BA4548 [Bacillus anthracis str. Ames]gi|3 [nrdb_11152004_Chlamydomonas]
  • conserved hypothetical protein [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • hypothetical protein BA4548 [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 336 amino acids

    Gene Ontology:
    Cellular Component: DNA polymerase III complex [ISS]
    Biological Process: DNA replication [ISS]
    Molecular Function: DNA-directed DNA polymerase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDIHKKIKK KQFAPLYLLY GTEAFFINET IKLITTEALE EEDREFNVVT YDLEEAYLED  60
   61 VVEDARTLPF FGERKVLLIK SPLFLTSQKE KLEQNIKILE EYIGEPSPFS ILVFVAPYEK 120
  121 LDERKKITKL LKKTADIVEA NAMQVQDVQK WIVARAEEGH VHIDNAAVSL LLELVGSNVT 180
  181 MLAKEMDKLT LYVGMGGEIT PKLVAELVPK SVEQNVFALT EKVVKKDIAG AMQILDGLFT 240
  241 QQEEPIKLLA LLVSQFRLLH QVKELQQRGY GQNQIASHIG VHPYRVKLAM NQTKFFSFEE 300
  301 LKKVIIELAE ADYSMKTGKM DKKLVLEFFL MRLNHM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..336] PSI-BLAST 41.045757 gamma subunit; gamma subunit of DNA polymerase III, N-domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA-directed DNA polymerase activity
    		•  6.09279996112705 bayes_pls_golite062009
  • DNA polymerase activity
    		•  6.04865791514294 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  3.99580940620614 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.13284212711072 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.77451606086272 bayes_pls_golite062009
  • binding
    		•  1.41264401383678 bayes_pls_golite062009
  • transferase activity
    		•  1.23626141560528 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  1.1653223755451 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • helicase activity
    		•  0.895387263223335 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.8104901979223 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.625617128641089 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
    		•  0.24468171323128 bayes_pls_golite062009
  • DNA clamp loader activity
    		•  0.20238478387743 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  0.156322124775303 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  0.156322124775303 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.147579541298736 bayes_pls_golite062009
  • nucleotide binding
    		•  0.114848452385726 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.113504049290503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.111293884322157 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0915913646217636 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  0.0398638249772338 bayes_pls_golite062009
  • DNA binding
    		•  0.0064778111446141 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle