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Protein Overview: gi|30257838, gi|...

General Information:
Name(s) found: gi|30263204 [NCBI NR]
gi|30257838 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30263204|ref|NP_845581.1| impB/mucB/samB family protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30257838|gb|AAP27067.1| impB/mucB/samB family protein [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 421 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: UV protection [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDYSILPNR IILCVDLRSF YASVSCIKMG LDPLHTKLAV VGDMNRNGSI VLAATPPLKA  60
   61 MGVKKLARLY EIPRQKDILI VNPIMGTYIK CSNYITKLAL QYVPIEDFHQ YSIDEFFMDI 120
  121 TDSIHLFARN PNEFALQFKR EIYEHTRIEC TIGIAPNLLM SKVALDIEAK KNKDGVAYWT 180
  181 YEDIPTKLWS IRPLSKFWGI SHKTETKLNQ KGIHSIGDLA NYPLKYLKQS FGVIGEELHL 240
  241 HSNGIDFSRI SEKYVPVTTS IGKSQILMRD YTIEEFPIIL LEHTEEVCYR LRQQNKLAQT 300
  301 VQFSIGYSKS YSGGFSKTHT LSRPTNLTMD IYQVCLYFLN QQYTGEPIRS ITISLTKLIG 360
  361 EGEEQISLFD NIIQREKEIK LTKVMDEIRT KFGKNSILRG ISYTNNATAR YRNTLLGGHK 420
  421 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] PSI-BLAST 60.522879 DinB homolog (DBH)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA-directed DNA polymerase activity
    		•  6.95239971917213 bayes_pls_golite062009
  • DNA polymerase activity
    		•  6.95195255108352 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  4.04220783770123 bayes_pls_golite062009
  • DNA primase activity
    		•  3.72146042552011 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.78467263837837 bayes_pls_golite062009
  • chromatin binding
    		•  1.71047958863735 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.06010018021303 bayes_pls_golite062009
  • catalytic activity
    		•  1.04899053677564 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.959511000267266 bayes_pls_golite062009
  • DNA binding
    		•  0.86778938742546 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
    		•  0.83818211151495 bayes_pls_golite062009
  • RNA polymerase activity
    		•  0.83818211151495 bayes_pls_golite062009
  • binding
    		•  0.808919229163124 bayes_pls_golite062009
  • transferase activity
    		•  0.784455099927681 bayes_pls_golite062009
  • exonuclease activity
    		•  0.778608024896469 bayes_pls_golite062009
  • protein binding
    		•  0.414848826944577 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.39441061793492 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.0700154911930899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle