YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|39996369, gi|...

General Information:
Name(s) found: gi|39996369 [NCBI NR]
gi|39983249 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|39996369|ref|NP_952320.1| signal peptidase I [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983249|gb|AAR34643.1| signal peptidase I [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 222 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal peptide processing [ISSLink to PubMed article]
    protein secretion [ISSLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYKETQYGQ STPSEQAAEP VKKKHIVREY AESIIIAVIL ALIIRTFVVQ AFKIPSGSME  60
   61 DTLAIGDHIL VSKFIYGTKI PFVDGRYLKI RDPKRGDVIV FEYPEDPSKD FIKRVIGLPG 120
  121 DTIQVVQKQV FINGKPFSVP QEVHKEKDVI PAAQNPRDNF GPVTVPENSY FVMGDNRDRS 180
  181 YDSRFWGFVK NSQIKGLAFI KYWSWDREKF RVRWGSIGDI IK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] PSI-BLAST 44.0 Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  0.485843348899278 bayes_pls_golite062009
  • catalytic activity
    		•  0.415601732277814 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.237734983138449 bayes_pls_golite062009
  • hydrolase activity
    		•  0.188292586303013 bayes_pls_golite062009
  • protein binding
    		•  0.0579980138351139 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle