YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996369, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYKETQYGQ STPSEQAAEP VKKKHIVREY AESIIIAVIL ALIIRTFVVQ AFKIPSGSME  60
   61 DTLAIGDHIL VSKFIYGTKI PFVDGRYLKI RDPKRGDVIV FEYPEDPSKD FIKRVIGLPG 120
  121 DTIQVVQKQV FINGKPFSVP QEVHKEKDVI PAAQNPRDNF GPVTVPENSY FVMGDNRDRS 180
  181 YDSRFWGFVK NSQIKGLAFI KYWSWDREKF RVRWGSIGDI IK

Type	Start	End	Confidence
Cytoplasmic	1	29	0.74
Transmembrane Helix	30	49	0.73
Non-Cytoplasmic	50	222	0.90