Protein Overview: gi|39995344, gi|...

General Information:
Name(s) found:	gi\|39995344 [NCBI NR] gi\|39982106 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|39995344\|ref\|NP_951295.1\| FNT family protein [Geobacter sulfurreducens PCA] [NCBI NR] gi\|39982106\|gb\|AAR33568.1\| transporter, FNT family [Geobacter sulfurreducens PCA] [NCBI NR]
Organism:	Geobacter sulfurreducens PCA
Length:	270 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	nitrite transport [ISS] formate transport [ISS]
Molecular Function:	formate transmembrane transporter activity [ISS] nitrate transmembrane transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKRFLTPA EALNATVENG RRVLTQSLAR TVLLSLLAGF YIAFGAQLAT VVTQDAALHV  60
   61 GQGVARLLGG SVFSVGLMLV VICGAELFTG NSLLTVALLH GEITWVKMLE NWGVVLLGNL 120
  121 AGSLFFAWLM VESRLWENGA VGDQAVRIAA AKCAIPFGAA LIRGILCNWL VCLAVLMATA 180
  181 ARDVGGKMLA CYVPIMTFVT SGFEHSVANM YFIPTGLLVA GARGTTEPDL SWGAFMGNVV 240
  241 PVTIGNVIGG VIFVAIAYWF IHLKKEGKQA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..270]	FFAS03	1.67	Glycerol uptake facilitator protein GlpF

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
transporter activity	3.29716739878922	bayes_pls_golite062009
substrate-specific channel activity	2.94662039655367	bayes_pls_golite062009
channel activity	2.9414344431192	bayes_pls_golite062009
passive transmembrane transporter activity	2.9414344431192	bayes_pls_golite062009
transmembrane transporter activity	2.89191055188639	bayes_pls_golite062009
substrate-specific transporter activity	2.82037090563528	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	2.65037422078415	bayes_pls_golite062009
nitrate transmembrane transporter activity	1.47913191081789	bayes_pls_golite062009
water transmembrane transporter activity	1.45822447350992	bayes_pls_golite062009
water channel activity	1.30496704143853	bayes_pls_golite062009
anion transmembrane transporter activity	0.909897861102259	bayes_pls_golite062009
ion transmembrane transporter activity	0.843641784538908	bayes_pls_golite062009
carboxylic acid transmembrane transporter activity	0.665829718813242	bayes_pls_golite062009
organic acid transmembrane transporter activity	0.641796590324282	bayes_pls_golite062009
inorganic anion transmembrane transporter activity	0.619845435332912	bayes_pls_golite062009
amine transmembrane transporter activity	0.232492592199022	bayes_pls_golite062009
cation transmembrane transporter activity	0.156116095173723	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle