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Protein Overview: gi|39982094, gi|...

General Information:
Name(s) found: gi|39995332 [NCBI NR]
gi|39982094 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995332|ref|NP_951283.1| cytochrome c oxidase, subunit II [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982094|gb|AAR33556.1| cytochrome c oxidase, subunit II [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: cytochrome-c oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILGACILL LTGITVVMVA FVIRYHRSRS PEPTSQAATN LWLEIVWTAL PTVLVLAMFY  60
   61 YGWSSYLSLR HVPPGAMEVT AVGRMWSWSF EYPGGRTSPR LYVPVGKPVR VDLVSKDVLH 120
  121 GFYIPAFRVK RDVVPGMKNH VWFVAPKAGS YDIFCSVYCG TGHSAMITTV EAIPDAEFQA 180
  181 WLSHGEEGEK EKEGHGRELL EKHGCLGCHS LDGSPRLGPT FKGIWGHQVT VTEDGVERTL 240
  241 TVDEAYLVRS IRQPAAQVVK GFPPVMPPYP GLSDEEVEEM VEFIRELK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 52.09691 Quinol oxidase (CyoA); Cytochrome O ubiquinol oxidase, subunit II
    2 View Details [214..288] PSI-BLAST 10.30103 Cytochrome c domain of caa3 oxygen oxidoreductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.910231434235845 bayes_pls_golite062009
  • receptor activity
    		•  0.536491030734287 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.416025501184058 bayes_pls_golite062009
  • protein binding
    		•  0.31459442397123 bayes_pls_golite062009
  • ephrin receptor binding
    		•  0.0573211102210707 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0444369516438172 bayes_pls_golite062009
  • receptor binding
    		•  0.02789117638033 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0187593755848567 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0187593755848567 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle