YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982094, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILGACILL LTGITVVMVA FVIRYHRSRS PEPTSQAATN LWLEIVWTAL PTVLVLAMFY  60
   61 YGWSSYLSLR HVPPGAMEVT AVGRMWSWSF EYPGGRTSPR LYVPVGKPVR VDLVSKDVLH 120
  121 GFYIPAFRVK RDVVPGMKNH VWFVAPKAGS YDIFCSVYCG TGHSAMITTV EAIPDAEFQA 180
  181 WLSHGEEGEK EKEGHGRELL EKHGCLGCHS LDGSPRLGPT FKGIWGHQVT VTEDGVERTL 240
  241 TVDEAYLVRS IRQPAAQVVK GFPPVMPPYP GLSDEEVEEM VEFIRELK

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.77
Transmembrane Helix	6	25	0.94
Cytoplasmic	26	40	0.79
Transmembrane Helix	41	63	0.89
Non-Cytoplasmic	64	288	0.77