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Protein Overview: gi|39982020, gi|...

General Information:
Name(s) found: gi|39995258 [NCBI NR]
gi|39982020 [NCBI NR]
Description(s) found:
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  • gi|39995258|ref|NP_951209.1| regulatory protein RecX [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982020|gb|AAR33482.1| regulatory protein RecX [Geobacter sulfurreducens PCA] [NCBI NR]
  • regulatory protein RecX [Geobacter sulfurreducens PCA]gi|39982020|gb|AAR33482.1| regulatory protein RecX [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • regulatory protein RecX [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 159 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of DNA repair [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSRPERRRD PLSTALDILS RRDHSEAELA RKLRSRGIDA GEIDRIVARL REFGYLNDRR  60
   61 VACRLAESAL AQGKMVGARL RVELRRRGIP PELAEEALAQ AAAGCDERAL VGDLLARKFP 120
  121 GFDPAVADPR EKRRVVGWFQ RRGFGLSAIL EALRCPVDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] FFAS03 1.08 Three-dimensional structure of S.aureus methicillin-resistance regulating transcriptional repressor MecI.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.4175884856209 bayes_pls_golite062009
  • DNA binding
    		•  2.94088153273597 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.79933235175398 bayes_pls_golite062009
  • transcription factor activity
    		•  2.3070929088217 bayes_pls_golite062009
  • binding
    		•  2.03697617454396 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.266645609122554 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.225337140748148 bayes_pls_golite062009
  • transcription activator activity
    		•  0.212739360527878 bayes_pls_golite062009
  • protein binding
    		•  0.00796693091603284 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle