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Protein Overview: Y1260_COXBU

General Information:
Name(s) found: Y1260_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Uncharacterized protein CBU_1260 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=CBU_1260 PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: cell outer membrane [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKIVIGVT ATAAFGIGAG ALAGGSVDQS YNNTSGAGFY VRGEAGYGLV DKKSGTSKVN  60
   61 FTGVTLTENS HTNTKKSRGF NGRVAIGYAF NPYFSLESGF TYYHPAYRDV NIAGSALPLF 120
  121 SSVQAEGRQK INLYSIDLMG KATLPIDNFY AFIEGGVAYV HTKFVAFTET GTAVSPLLPP 180
  181 VTSSVAVKVP SSSKGYIRPK AGIGVGYNIT QNIGVDVSYS RVFGQGKINN TNYLPNLNAV 240
  241 TLGLTYKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 37.522879 Outer membrane protein A (OMPA) transmembrane domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • porin activity
    		•  3.72603691775929 bayes_pls_golite062009
  • wide pore channel activity
    		•  2.56764837317779 bayes_pls_golite062009
  • channel activity
    		•  0.500502774665998 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.500502774665998 bayes_pls_golite062009
  • transporter activity
    		•  0.32956132877646 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.31625101261287 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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