YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y1260_COXBU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKIVIGVT ATAAFGIGAG ALAGGSVDQS YNNTSGAGFY VRGEAGYGLV DKKSGTSKVN  60
   61 FTGVTLTENS HTNTKKSRGF NGRVAIGYAF NPYFSLESGF TYYHPAYRDV NIAGSALPLF 120
  121 SSVQAEGRQK INLYSIDLMG KATLPIDNFY AFIEGGVAYV HTKFVAFTET GTAVSPLLPP 180
  181 VTSSVAVKVP SSSKGYIRPK AGIGVGYNIT QNIGVDVSYS RVFGQGKINN TNYLPNLNAV 240
  241 TLGLTYKF

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	248	0.99