YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24375491, gi|...

General Information:
Name(s) found: gi|24375491 [NCBI NR]
gi|24350351 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375491|ref|NP_719534.1| proton/glutamate symporter, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350351|gb|AAN56978.1|AE015831_2 proton/glutamate symporter, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 408 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: L-glutamate transport [ISSLink to PubMed article]
    Molecular Function: solute:hydrogen symporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSLSTRIF IGLFTGLILG TLVQYFLNDI GFFSGNLVEL ASGVGTMFVN MIMMLVVPLV  60
   61 FVSIVCGVCE LQDLKSFGRL GGKTFGFYIV NTVVAISTAL LVVLLLDPGK GVDMSSADGV 120
  121 AITATELPSL IALLIDIVPR NPVAAFMSGN MLQVIFMALM LGGVMKSLGE HVAGAVQGFQ 180
  181 TANKIMMKLI SVVMSLAPFG VFALMFKLGA TLDAAVFMSV LEYLVIILAL LLLWIFVVYP 240
  241 LSVGMFTPIS AKTFRAKTQE QVLFSLSTAS SNATIPVTMR TLTEKLGVNR AVAGFGVPLG 300
  301 ATMNMGGVAI YITIAIFFVA NAFGMPITSE QLPSLLFSIF LLSVGAGGVP GGGMVMIGVL 360
  361 IHQMGLPIEA FAIVAALDRI IDMVLTSCNV VGDTAVLTIV DQTEKAVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..408] PSI-BLAST 82.154902 Structure of glutamate transporter homolog from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • dicarboxylic acid transmembrane transporter activity
    		•  5.4077039375589 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  5.35323738672724 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  5.3122318185646 bayes_pls_golite062009
  • sodium:dicarboxylate symporter activity
    		•  4.40071591934747 bayes_pls_golite062009
  • anion:cation symporter activity
    		•  4.38991307992111 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  3.64519243918556 bayes_pls_golite062009
  • transporter activity
    		•  3.59726235774831 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.48998062737764 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.25811511579861 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.16015523656183 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.11723298209538 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.90153102682056 bayes_pls_golite062009
  • organic acid:sodium symporter activity
    		•  2.72996970117754 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.5316793478278 bayes_pls_golite062009
  • L-aspartate transmembrane transporter activity
    		•  2.53126289198474 bayes_pls_golite062009
  • symporter activity
    		•  2.37209552756137 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  2.37209552756137 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  2.36442337809135 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.31510944441012 bayes_pls_golite062009
  • L-amino acid transmembrane transporter activity
    		•  2.2399865852858 bayes_pls_golite062009
  • C4-dicarboxylate transmembrane transporter activity
    		•  2.22681603191212 bayes_pls_golite062009
  • acidic amino acid transmembrane transporter activity
    		•  1.63992398037381 bayes_pls_golite062009
  • L-glutamate transmembrane transporter activity
    		•  1.63992398037381 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.727865493684019 bayes_pls_golite062009
  • solute:sodium symporter activity
    		•  0.63565466616857 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  0.54912532283943 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle