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Protein Overview: gi|24375285, gi|...

General Information:
Name(s) found: gi|24375285 [NCBI NR]
gi|24350088 [NCBI NR]
Description(s) found:
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  • gi|24375285|ref|NP_719328.1| renal dipeptidase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350088|gb|AAN56772.1|AE015812_11 renal dipeptidase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • renal dipeptidase family protein [Shewanella oneidensis MR-1]gi|24350088|gb|AAN56772.1| renal dipeptidase family protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • renal dipeptidase family protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [ISSLink to PubMed article]
    Molecular Function: dipeptidyl-peptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAINHRRRT LLKGLSAVTG LSAASALSPF ASFSSLAAPL PPRARRLYID GLSFLPDDLA  60
   61 DVRASGLDAF LCDISAIETI EQADGTVNYK RTYKACMESI QQAAKRVSEH PDILLQGLTG 120
  121 RDIQLARENN RTAVFFQIQG ADCVEEDSDA NQWARVDAFH RQGLCALQLT HHYGNTFAGG 180
  181 ALDNDANGGL NKPLTNHGRA LIAKLNQANI LIDVSHSSAQ TALDVAKLSR APIVQSHGAA 240
  241 RGIVKHARCS PDEVIRAIAN SGGVFGVFMM SFWLTNKAIP TVNDYIRQLE YVARIGGVDC 300
  301 VAIANDFPLR GQENLLALNN DNTQGVKEYQ DWWYSLRAKK VLGFDAEPRH VVIPELNHIE 360
  361 RMSRIDDALA KARFKSTDRD RFMGGNWHRV LNQVLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 105.0 Renal dipeptidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.95973123088728 bayes_pls_golite062009
  • catalytic activity
    		•  2.072432847481 bayes_pls_golite062009
  • peptidase activity
    		•  0.531944091157011 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.481958484200481 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  0.0337217238364798 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.00144841848163502 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle