YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24375285, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAINHRRRT LLKGLSAVTG LSAASALSPF ASFSSLAAPL PPRARRLYID GLSFLPDDLA  60
   61 DVRASGLDAF LCDISAIETI EQADGTVNYK RTYKACMESI QQAAKRVSEH PDILLQGLTG 120
  121 RDIQLARENN RTAVFFQIQG ADCVEEDSDA NQWARVDAFH RQGLCALQLT HHYGNTFAGG 180
  181 ALDNDANGGL NKPLTNHGRA LIAKLNQANI LIDVSHSSAQ TALDVAKLSR APIVQSHGAA 240
  241 RGIVKHARCS PDEVIRAIAN SGGVFGVFMM SFWLTNKAIP TVNDYIRQLE YVARIGGVDC 300
  301 VAIANDFPLR GQENLLALNN DNTQGVKEYQ DWWYSLRAKK VLGFDAEPRH VVIPELNHIE 360
  361 RMSRIDDALA KARFKSTDRD RFMGGNWHRV LNQVLI

Type	Start	End	Confidence
Signal Peptide	1	37	0.98
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	396	0.98