YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24375059, gi|...

General Information:
Name(s) found: gi|24375059 [NCBI NR]
gi|24349807 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|24375059|ref|NP_719102.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349807|gb|AAN56546.1|AE015791_10 phosphoribosylaminoimidazole carboxylase, ATPase subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: purine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: phosphoribosylaminoimidazole carboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQTSTKPKV WVLGNGQLGA MLTHAGEPLA IDVRAVDIMT PTDDILPLAP NDIITAEREQ  60
   61 WPESALSLQL STHPHFVNGP VFSRLADRYS QKSLLDQLNV PTAPWSLVDD HTKVETLYQA 120
  121 FGPRVLMKRR TGGYDGKGQH WLKQAEAGDI PHDWRNLAIA EQAINFDEEV SLVGVRTREG 180
  181 QCVFYPLTLN LHQDGILMAS IAPLARLDHL QAQAETMLSA IMHELEYAGV MAMECFRVGD 240
  241 NLLVNELAPR VHNSGHWTQA GTHMDQFQLH LRALCGIAIP QPQVNFQCVM VNLIGIDNDP 300
  301 RWLSLPNAEL YWYNKEVRPG RKVGHLNLSV PNLTVLTNSI SALQTWMPNQ YQAPLAWILA 360
  361 EFTKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 62.522879 N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain; N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoribosylaminoimidazole carboxylase activity
    		•  8.30252180826751 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  4.46679646341684 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  3.45358843752722 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  2.80055235272563 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  2.72231827182887 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • ligase activity
    		•  2.47642734831155 bayes_pls_golite062009
  • phosphoribosylamine-glycine ligase activity
    		•  1.37477732460326 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.11645327303429 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.319428284569229 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.140669118443663 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle