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Protein Overview: gi|24374586, gi|...

General Information:
Name(s) found: gi|24374586 [NCBI NR]
gi|24349196 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374586|ref|NP_718629.1| amidophosphoribosyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349196|gb|AAN56073.1|AE015743_1 amidophosphoribosyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 504 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: purine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: amidophosphoribosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGIVGIVGQ SSVNQTIYDA LTVLQHRGQD AAGIVTVDRG AFRLRKANGL VKDVFEVKHM  60
   61 QRLQGNAGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTLEL AEGLIKKRRH 120
  121 VNTTSDSEVL LNLLADELQK TTSLDLTADE VFDTIAKVHE QARGAYAVVA MIIGQGLVAF 180
  181 RDPFGIRPLV LGKHETPTGT EYMVASESVA LDAVGFEVMR DVAPGEAIYI SLDGNLYTRQ 240
  241 CAKEPSYSPC IFEFVYFARP DSTIDNVSVY ASRVNMGAKL GEKIKKEWYD HDIDVVIPIP 300
  301 ETSCDIALEI ARCMDLPYRQ GFVKNRYIGR TFIMPGQQER KKSVRRKLNA INTEFKGKNV 360
  361 LLVDDSIVRG TTSEQIIEMA REAGAKKVYF ASAAPEIRFP NVYGIDMPTS NELIAHGRDA 420
  421 DEIAKLIGAD GIIFQNLPDL IEAVRMENPE IKRFETSVFD GHYITNDVDQ SYLDHLTQLR 480
  481 NDDAKADRNK DIGTNLELHN VCHP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..504] PSI-BLAST 117.0 Glutamine PRPP amidotransferase, C-terminal domain; Glutamine PRPP amidotransferase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uracil phosphoribosyltransferase activity
    		•  2.36237864658341 bayes_pls_golite062009
  • ribose phosphate diphosphokinase activity
    		•  1.51875493459374 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • adenine phosphoribosyltransferase activity
    		•  0.985266832225609 bayes_pls_golite062009
  • diphosphotransferase activity
    		•  0.749909396904601 bayes_pls_golite062009
  • hypoxanthine phosphoribosyltransferase activity
    		•  0.625087274084001 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.283725923623827 bayes_pls_golite062009
  • ligase activity
    		•  0.204093345072151 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  0.148898393751978 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.0940838340168359 bayes_pls_golite062009
  • peptidase activity
    		•  0.0898497842822991 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.057753538747651 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.012663147802059 bayes_pls_golite062009
  • protein binding
    		•  0.00621436730716318 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle