Protein Overview: gi|24374087, gi|...

General Information:
Name(s) found:	gi\|24374087 [NCBI NR] gi\|24348570 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|24374087\|ref\|NP_718130.1\| sensor histidine kinase/response regulator [Shewanella oneidensis MR-1] [NCBI NR] gi\|24348570\|gb\|AAN55574.1\|AE015696_4 sensor histidine kinase/response regulator [Shewanella oneidensis MR-1] [NCBI NR]
Organism:	Shewanella oneidensis MR-1
Length:	1019 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	two-component signal transduction system (phosphorelay) [ISS]
Molecular Function:	two-component sensor activity [ISS] two-component response regulator activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAMIKTYNK SIKRHRLLFL LYCITVGLLA NLSVVAIPIA VPLNVGNVAI LVILARLGPL  60
   61 WALVCFAFVT YPLPSDIAII LTIVQVILFG FYINQKNSSI IKISIAYVAI VFIANKFLLP 120
  121 EAITDNQISL LTFTSLSTAL FIWTIKATNL LLSLYVNNEQ LRKQSLQHQL SYRVGLYTAI 180
  181 PATLLITLGL NGVTNLHLVK QMAYYQNEVN ELNKNIEEKL KNYSNKIETI AKLTDIEVTK 240
  241 RILMQLVSQS PEFISALITD TNGTVNKFYK KDINDDRIAK ASVADRAYFY EVKKTMSTYI 300
  301 SDTFTGRSLG EDQLFAVSTP IIDNNQFNGV LQLAIKLDSL LEVFNLPNDS ISHRILIDNS 360
  361 GKKVWGNNIS GDVGSIWIRP KHSEPMQKAF LEKSLFNPLE PIIFSQDAHH LIISNQVGAT 420
  421 DWKLYFFIDT DELTLDFSIY YLLSLLLITL ILEISVQFSK RFVKHYTQAL ELLVDYTQQW 480
  481 DGKSTTKKNL NFTQSALEID TLAHSFVNMQ RRVAGAHHAI ISTMNEVKLL NEALEERVEK 540
  541 RTKELEQERD KANQLAAVKA RFLANMSHEI RTPITIIKGF TEQILPNTQG EVHNALCKIE 600
  601 QNTLHLQNVI NDILDAAKID EGKMTIAEQT VAIIPLLNSL SDSMKFLART KNLTTELNID 660
  661 IADIEHIITD PFRLKQILLN FISNAVKFTP KGTVKLVANI TNADELCIAV IDKGIGISDQ 720
  721 QASTLFEAFT QADSSTSRDF GGTGLGLFIS KQLADAMFIK LHMQSELGVG SCFSVTLPES 780
  781 KIIKNLTEFS KNEKKIEHTT PDWKNYHVLI VDDVEDIREL IDIYLKDTEI AVDFAQNGQQ 840
  841 AIQLVEKSHY DLVILDQQMP IMDGFTAAKA IREFNKSIPL LLLSADILDT EPHQKSPFNK 900
  901 TIAKPFTKNQ LIETIRLFIV DNSISTKKVN EEDEDELTIE YLHTLPNVLL LLEKLVKCED 960
  961 RTHLEHELHK LKGTSACLGL IAISHCAANL HNLLKERMIK LNELDDISLA VKNALKEKE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..158]	deduced	N/A	No confident structure predictions are available.
2	View Details	[159..419]	FFAS03	4.02	No description for 2p7jA was found.
3	View Details	[420..533]	FFAS03	3.13	M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure
4	View Details	[534..789]	PSI-BLAST	47.69897	Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
5	View Details	[790..1019]	PSI-BLAST	30.69897	PhoB; PhoB receiver domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
two-component sensor activity	2.88093868237858	bayes_pls_golite062009
protein histidine kinase activity	2.86151216540335	bayes_pls_golite062009
phosphotransferase activity, nitrogenous group as acceptor	2.80671328721504	bayes_pls_golite062009
protein kinase activity	1.74105675066805	bayes_pls_golite062009
two-component response regulator activity	1.62873572477094	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	1.58981311381645	bayes_pls_golite062009
kinase activity	1.5133458700147	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.31628115739307	bayes_pls_golite062009
signal transducer activity	1.10204821596482	bayes_pls_golite062009
molecular transducer activity	1.10204821596482	bayes_pls_golite062009
catalytic activity	0.970922685016416	bayes_pls_golite062009
transferase activity	0.839270468560673	bayes_pls_golite062009
binding	0.704248066961418	bayes_pls_golite062009

3

No functions predicted.

4

No functions predicted.

5

Term	Confidence	Notes
two-component response regulator activity	7.02872640261738	bayes_pls_golite062009
signal transducer activity	4.51666042720644	bayes_pls_golite062009
molecular transducer activity	4.51666042720644	bayes_pls_golite062009
transcription regulator activity	3.44888100104099	bayes_pls_golite062009
protein histidine kinase activity	2.35011582062573	bayes_pls_golite062009
two-component sensor activity	2.32303301074957	bayes_pls_golite062009
phosphotransferase activity, nitrogenous group as acceptor	2.28838869071567	bayes_pls_golite062009
binding	1.22427537074115	bayes_pls_golite062009
DNA binding	1.11037597107903	bayes_pls_golite062009
protein kinase activity	1.00737355751913	bayes_pls_golite062009
nucleic acid binding	0.93151849951839	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.811771244977462	bayes_pls_golite062009
kinase activity	0.725824770559857	bayes_pls_golite062009
transcription factor activity	0.62886970109503	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.476057209677045	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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