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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374087, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAMIKTYNK SIKRHRLLFL LYCITVGLLA NLSVVAIPIA VPLNVGNVAI LVILARLGPL  60
   61 WALVCFAFVT YPLPSDIAII LTIVQVILFG FYINQKNSSI IKISIAYVAI VFIANKFLLP 120
  121 EAITDNQISL LTFTSLSTAL FIWTIKATNL LLSLYVNNEQ LRKQSLQHQL SYRVGLYTAI 180
  181 PATLLITLGL NGVTNLHLVK QMAYYQNEVN ELNKNIEEKL KNYSNKIETI AKLTDIEVTK 240
  241 RILMQLVSQS PEFISALITD TNGTVNKFYK KDINDDRIAK ASVADRAYFY EVKKTMSTYI 300
  301 SDTFTGRSLG EDQLFAVSTP IIDNNQFNGV LQLAIKLDSL LEVFNLPNDS ISHRILIDNS 360
  361 GKKVWGNNIS GDVGSIWIRP KHSEPMQKAF LEKSLFNPLE PIIFSQDAHH LIISNQVGAT 420
  421 DWKLYFFIDT DELTLDFSIY YLLSLLLITL ILEISVQFSK RFVKHYTQAL ELLVDYTQQW 480
  481 DGKSTTKKNL NFTQSALEID TLAHSFVNMQ RRVAGAHHAI ISTMNEVKLL NEALEERVEK 540
  541 RTKELEQERD KANQLAAVKA RFLANMSHEI RTPITIIKGF TEQILPNTQG EVHNALCKIE 600
  601 QNTLHLQNVI NDILDAAKID EGKMTIAEQT VAIIPLLNSL SDSMKFLART KNLTTELNID 660
  661 IADIEHIITD PFRLKQILLN FISNAVKFTP KGTVKLVANI TNADELCIAV IDKGIGISDQ 720
  721 QASTLFEAFT QADSSTSRDF GGTGLGLFIS KQLADAMFIK LHMQSELGVG SCFSVTLPES 780
  781 KIIKNLTEFS KNEKKIEHTT PDWKNYHVLI VDDVEDIREL IDIYLKDTEI AVDFAQNGQQ 840
  841 AIQLVEKSHY DLVILDQQMP IMDGFTAAKA IREFNKSIPL LLLSADILDT EPHQKSPFNK 900
  901 TIAKPFTKNQ LIETIRLFIV DNSISTKKVN EEDEDELTIE YLHTLPNVLL LLEKLVKCED 960
  961 RTHLEHELHK LKGTSACLGL IAISHCAANL HNLLKERMIK LNELDDISLA VKNALKEKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle