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Protein Overview: gi|24373935, gi|...

General Information:
Name(s) found: gi|24373935 [NCBI NR]
gi|24348366 [NCBI NR]
Description(s) found:
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  • gi|24373935|ref|NP_717978.1| beta-lactamase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348366|gb|AAN55422.1|AE015679_8 beta-lactamase [Shewanella oneidensis MR-1] [NCBI NR]
  • beta-lactamase [Shewanella oneidensis MR-1]gi|24348366|gb|AAN55422.1| beta-lactamase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • beta-lactamase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: antibiotic biosynthetic process [ISSLink to PubMed article]
    Molecular Function: beta-lactamase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISPLNSHT LGSTSLGLIL LVAPLMVHAT PQNALTASQD TKTIKSIVDS AVNPLMAEYG  60
   61 IPGAVLGISM NGQQYFFPYG VSSKNTAEKV SKNTLFEIGS ISKTFTATLA TYAQFEGKLT 120
  121 LTDKVSQYLP ELAGSHFDQI NLINLATHTA GDLPMQVPDN VTNNTELISY FKAWQPAYPA 180
  181 GTHRNYANPS IGLLGVIAAK QLGQGFPEAV EQTLFRQLGM TNSYLMVPTN KMADYAQGYN 240
  241 KQDQPVRLNP GVLADEAYGI KTTAVDLLRF VETNMQQHSV PARLQRAIDA THTGYFDVGP 300
  301 MTQEMIWEHY PYPISLDNLL AGHTQDVVFG SMPVKAITPP QSPQQNVWIN KTGSTGGFAA 360
  361 YVAYIPAKKL AMVLLSNKNY PVPPRVTVGY QILTGLEKLP N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..401] PSI-BLAST 97.0 AMPC beta-Lactamase, class C

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • beta-lactamase activity
    		•  6.11754430606414 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  4.78031291375234 bayes_pls_golite062009
  • catalytic activity
    		•  2.2253600206851 bayes_pls_golite062009
  • hydrolase activity
    		•  1.60399436620363 bayes_pls_golite062009
  • peptidase activity
    		•  1.19806036181576 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.93520664618869 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.9301046317358 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.7685205097747 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.76747998716775 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.373099549833319 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  0.22611872796164 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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