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Protein Overview: gi|24373045, gi|...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..415] PSI-BLAST 25.221849 Crystal structure of a lambda integrase dimer bound to a COC' core site

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • structure-specific DNA binding
  • 2.96794540657137 bayes_pls_golite062009
  • chromatin binding
  • 2.66956311972752 bayes_pls_golite062009
  • catalytic activity
  • 1.85476765215403 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.47056442077417 bayes_pls_golite062009
  • DNA binding
  • 1.08208472364243 bayes_pls_golite062009
  • nucleic acid binding
  • 1.01945666037816 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.88630365094839 bayes_pls_golite062009
  • binding
  • 0.849061082531999 bayes_pls_golite062009
  • methyl-CpG binding
  • 0.644006146507516 bayes_pls_golite062009
  • transcription regulator activity
  • 0.433129028335043 bayes_pls_golite062009
  • protein binding
  • 0.391840757563427 bayes_pls_golite062009
  • DNA secondary structure binding
  • 0.32168641878414 bayes_pls_golite062009
  • transcription factor activity
  • 0.135216468398819 bayes_pls_golite062009
  • transcription factor binding
  • 0.0858654055973298 bayes_pls_golite062009
  • four-way junction DNA binding
  • 0.0788334929658094 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle