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Protein Overview: gi|24347002, gi|...

General Information:
Name(s) found: gi|24372885 [NCBI NR]
gi|24347002 [NCBI NR]
Description(s) found:
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  • gi|24372885|ref|NP_716927.1| aquaporin Z [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347002|gb|AAN54372.1|AE015574_8 aquaporin Z [Shewanella oneidensis MR-1] [NCBI NR]
  • aquaporin Z [Shewanella oneidensis MR-1]gi|24347002|gb|AAN54372.1| aquaporin Z [Shewanella oneidensis MR-1]gi|46395862|sp|Q8EHC1|AQPZ_SHEON Aquaporin Z [nrdb_11152004_Chlamydomonas]
  • aquaporin Z [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: water transport [ISSLink to PubMed article]
    Molecular Function: water channel activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKMAAEFL GTLWLVLGGC GSAVLAAAFP EVGIGLLGVS LAFGLTVLTM AFAIGHISGC  60
   61 HLNPAVSFGL WAGGRFPTSE LLPYIIAQVA GGIAGAGVLY LIASGQEGFS LAAGFASNGF 120
  121 GEHSPGGYSM ISVMICEIVM TLFFLLVILG STDERAPKGF APIAIGLCLT LIHLISIPIS 180
  181 NTSVNPARST GPALFVGDWA VSQLWLFWAA PIIGAILAGV IYRYFNAAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] PSI-BLAST 32.09691 2.5 Angstrom Resolution X-ray Structure of Aquaporin Z

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • water transmembrane transporter activity
    		•  10.3414560257964 bayes_pls_golite062009
  • water channel activity
    		•  10.2169080705067 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  6.49777654791183 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  6.47484344601535 bayes_pls_golite062009
  • channel activity
    		•  6.47484344601535 bayes_pls_golite062009
  • transporter activity
    		•  5.23077472964938 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  5.06520190871345 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.83314424546299 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.7450921192571 bayes_pls_golite062009
  • glycerol channel activity
    		•  4.65460547189577 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.89377210429696 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.66719193997824 bayes_pls_golite062009
  • pyrimidine transmembrane transporter activity
    		•  2.42183378687544 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.14052261196782 bayes_pls_golite062009
  • amide transmembrane transporter activity
    		•  1.91157799400296 bayes_pls_golite062009
  • urea transmembrane transporter activity
    		•  1.91157799400296 bayes_pls_golite062009
  • urea channel activity
    		•  1.91157799400296 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.57078059027065 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  1.57017437613762 bayes_pls_golite062009
  • cation channel activity
    		•  1.51074107596522 bayes_pls_golite062009
  • ion channel activity
    		•  1.40084800732756 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  1.10865678129643 bayes_pls_golite062009
  • binding
    		•  1.09154723976574 bayes_pls_golite062009
  • nucleobase transmembrane transporter activity
    		•  0.911381096418279 bayes_pls_golite062009
  • purine transmembrane transporter activity
    		•  0.911381096418279 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.820388351311438 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.820388351311438 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.545299611300918 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.315342449421593 bayes_pls_golite062009
  • protein binding
    		•  0.179478120921785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle