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Protein Overview: gi|24346904, gi|...

General Information:
Name(s) found: gi|24372810 [NCBI NR]
gi|24346904 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372810|ref|NP_716852.1| periplasmic sensory protein associated with the TorRS two-component regulatory system [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346904|gb|AAN54297.1|AE015567_3 periplasmic protein TorT [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 359 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: amine metabolic process [ISSLink to PubMed article]
    two-component signal transduction system (phosphorelay) [ISSLink to PubMed article]
    Molecular Function: two-component sensor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKFWQALLT LTTFSLLCSP VAKANPQSWP LEQRSPFNAK IQQSRALDYL PLTKAQQAWR  60
   61 LCVLVPHLKD AYWIGIDYGL IQHAKHLGVS LDLFEAGSYY HQDKQLAQLR SCMSGDYDAI 120
  121 LLGAVSPNLL EHFPLPLSKP IIALVNKLNS DQVLTHIGVN WYQMGLRAGQ FIKADAKVHT 180
  181 PTQPTTLALL AGPENVGGTD LVEQGIRHAL EGSNVSISAI QHADNNRNLY RDQLQILLKA 240
  241 QQPNYILGSA VAIEAAVSTL KQKHMTQDIK LVSSYLSPAI LRGLKRQKVL YSNDDLVVLQ 300
  301 GKLAIDVAVK QLEGATPFGD IGPAIVGRTM SANTQSELSF SLAEADFYPL YQVRPPSLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 65.69897 Purine repressor (PurR), N-terminal domain; Purine repressor (PurR), C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.58080550382179 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.25602450317772 bayes_pls_golite062009
  • signal transducer activity
    		•  0.96140381988106 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.96140381988106 bayes_pls_golite062009
  • transcription factor activity
    		•  0.60760584832227 bayes_pls_golite062009
  • DNA binding
    		•  0.49435758089932 bayes_pls_golite062009
  • receptor activity
    		•  0.34490133946623 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.31566974251112 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.08341235012603 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.06019622148087 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle