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Protein Overview: SELA_SHEON

General Information:
Name(s) found: SELA_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • L-seryl-tRNA(Sec) selenium transferase OS=Shewanella oneidensis (strain MR-1) GN=selA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA aminoacylation for protein translation [ISSLink to PubMed article]
    Molecular Function: L-seryl-tRNASec selenium transferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTQVPDTPQ ALYRALPSMD SLLADAVLAP LLQRYGKAAV KAALDSQLRT ARELIAQERR  60
   61 LPAWCANPSL LNGYLVDQLS KDYSHSLKPV WNLTGTILHT NLGRAQQSEA AIRAVTSVMR 120
  121 YPTPLEFELA AGERGHRDNA ISGLIQRLTG AEACCVVNNN AAAVLLMLSA VAAGKEVIVS 180
  181 RGELVEIGGA FRIPDIMRQA GCTLVEVGST NRTHLKDYEQ AITENTAAIM KVHTSNYHIS 240
  241 GFTAAVEEAR LGQLCRERGI LLISDLGSGS LTDLRRFGLK QEPTPQAMLA DGVDLVSFSG 300
  301 DKLLGGPQSG LIVGKQALIN KLQSHPLKRA LRCDKLILAA LEATLIHYLN PETLDKELPI 360
  361 MAKFARSQAE LRQIGERLQQ ALAPLFTPSY GLELVECQTQ VGSGSQPDTF LPSIGLCFNA 420
  421 QEGGSLTLLE QHFKQAQRPV IGRMTQDQLR LDLRGIDDEA ELLAELSTLG VQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..473] PSI-BLAST 55.522879 Aromatic aminoacid aminotransferase, AroAT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  2.32006532103078 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.59895155864374 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.59895155864374 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.994935084630764 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.6849039330512 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.636782746250952 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.526698053525422 bayes_pls_golite062009
  • DNA binding
    		•  0.516618701017633 bayes_pls_golite062009
  • cystathionine gamma-lyase activity
    		•  0.505859361763689 bayes_pls_golite062009
  • binding
    		•  0.450641761940864 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.271623203801431 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.212525865555941 bayes_pls_golite062009
  • transcription factor activity
    		•  0.188693175079415 bayes_pls_golite062009
  • structural molecule activity
    		•  0.0788116272021627 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
    		•  0.0669652799570574 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle