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Protein Overview: RSC9_YEAST

General Information:
Name(s) found: RSC9_YEAST [Swiss-Prot]
Description(s) found:
  • Chromatin structure-remodeling complex subunit RSC9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC9 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 581 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLASNTPL NGTPVSEAPA TSSEPVNMFE TMVANPIKVS RLQSNGVLTG PAANTKSIHY  60
   61 SLANFNVFQS LPKETARGVD DLTRMEMALL SGIPEEIKWS LKKYLTYSNK APYMISLRTL 120
  121 PDLLPLFKTF ILPLERIVEG LNKSSICDSK AMDSLQMGLN ALLILRNLAQ DTDSVQILVK 180
  181 DREIKSFILF ILKKFQCVAT GDNKWQLYEG NATFFNELTH YTLDLMEAIS SYIAPAMKDD 240
  241 HYFQTLVSIL NYTKDRYMVI SILRSLSRLL VRSKANEESA ADNLDHKTLS LIVSFLLLEC 300
  301 DSELIIASLD FLYQYILPGS QRITELFKSK ECSLILEATL PNLLSYNIAT PDYHLLQKHK 360
  361 IRLIKRLKPP APKEPPNLSE DLFQQLFKLN EPLRSTAWLR CCFEPVQEAE FTQISLWRSY 420
  421 ESKFGQPVRE SGRKLLPAVE FIKNVSNAFN NAAAIVITDP VTGKKRFVIK GIQPRFKALG 480
  481 IADGERESQV PISALKSKFL NDSKEITPAR QNSIPEVKFP QELSDVSKVA CTFLCLLSND 540
  541 TDDGAGSAFC QRIRPLVLHK LADIPPLTLA LSEYMENTSG L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..54] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [55..500] MSA 1.002847 View MSA. No confident structure predictions are available.
    3 View Details [501..581] deduced N/A No confident structure predictions are available.
    4 View Details [482..581] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  5.23858959608048 bayes_pls_golite062009
  • DNA binding
    		•  4.78517210147551 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.72059012764202 bayes_pls_golite062009
  • transcription factor activity
    		•  4.02736190679869 bayes_pls_golite062009
  • binding
    		•  3.37660003833383 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.41045867230388 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  2.21432668306508 bayes_pls_golite062009
  • transcription activator activity
    		•  2.13702350917359 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.9708626903609 bayes_pls_golite062009
  • transcription elongation regulator activity
    		•  1.75305601393584 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  1.26260991083343 bayes_pls_golite062009
  • transcription factor binding
    		•  0.752335897765285 bayes_pls_golite062009
  • protein binding
    		•  0.726445167461826 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.490809930581315 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
    		•  0.0406721670764369 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle