Protein Overview: MTPB_ARATH

General Information:
Name(s) found:	MTPB_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|71151962\|sp\|Q6DBM8.1\|MTPB_ARATH RecName: Full=Metal tolerance protein B; Short=AtMTPb; Short=AtMTP4 [NCBI NR] gi\|53850517\|gb\|AAU95435.1\| At2g29410 [Arabidopsis thaliana] [NCBI NR] gi\|50198826\|gb\|AAT70445.1\| At2g29410 [Arabidopsis thaliana] [NCBI NR] gi\|42569441\|ref\|NP_180502.2\| MTPB1 (METAL TOLERANCE PROTEIN B1); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter [Arabidopsis thaliana] [NCBI NR] Metal tolerance protein B OS=Arabidopsis thaliana GN=MTPB PE=2 SV=1 [Swiss-Prot] At2g29410 [Arabidopsis thaliana]gi\|50198826\|gb\|AAT70445.1\| At2g29410 [Arabidopsis thaliana]gi\|42569441\|ref\|NP_180502.2\| zinc transporter, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Metal tolerance protein B [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: ATMTPB1, MTPB1 \| MTPB1; efflux transmembrane transporter/ zinc ion transmembrane transporter \| chr2:12623887-12625014 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] MTPB1; efflux permease/ zinc ion transporter [Arabidopsis thaliana] [nr-271106-contam.fasta] At2g29410 [Arabidopsis thaliana] [nr-271106-contam.fasta] Metal tolerance protein B (AtMTPb) (AtMTP4) [nr-271106-contam.fasta] \| Symbols: MTPB1, ATMTPB1 \| metal tolerance protein B1 \| chr2:12616810-12617937 FORWARD LENGTH=375 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	375 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA]
Biological Process:	cation transport [IEA] zinc ion transport [ISS]
Molecular Function:	inorganic anion transmembrane transporter activity [ISS] efflux transmembrane transporter activity [ISS] zinc ion transmembrane transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEQICILK PDDEEEMESP SPSKTEENLG VVPLSCAFTR QEHCVSETKE REESTRRLSS  60
   61 LIFLYLIVMS VQIVGGFKAN SLAVMTDAAH LLSDVAGLCV SLLAIKVSSW EANPRNSFGF 120
  121 KRLEVLAAFL SVQLIWLVSG VIIHEAIQRL LSRSREVNGE IMFGISAFGF FMNLVMVLWL 180
  181 GHNHSHHHHD HHHHHHNHKH QHQHHHKEVV AEEEEEEMNP LKGEKSSSKE MNINIQGAYL 240
  241 HAMADMIQSL GVMIGGGIIW VKPKWVLVDL ICTLVFSAFA LAATLPILKN IFGILMERVP 300
  301 RDMDIEKLER GLKRIDGVKI VYDLHVWEIT VGRIVLSCHI LPEPGASPKE IITGVRNFCR 360
  361 KSYGIYHATV QVESE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
cation transmembrane transporter activity	6.3253503604398	bayes_pls_golite062009
ion transmembrane transporter activity	6.22189384650962	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	5.82185991246167	bayes_pls_golite062009
transporter activity	4.27173462293249	bayes_pls_golite062009
transmembrane transporter activity	4.18558383943492	bayes_pls_golite062009
substrate-specific transporter activity	3.94511592355578	bayes_pls_golite062009
metal ion transmembrane transporter activity	2.43294134632841	bayes_pls_golite062009
transition metal ion transmembrane transporter activity	2.32644140472297	bayes_pls_golite062009
efflux transmembrane transporter activity	1.98656970252979	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	1.95281540802467	bayes_pls_golite062009
cation channel activity	1.55011961058299	bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity	1.31663166812163	bayes_pls_golite062009
binding	1.02283270169384	bayes_pls_golite062009
ion channel activity	1.01093555209783	bayes_pls_golite062009
passive transmembrane transporter activity	0.963824080292546	bayes_pls_golite062009
channel activity	0.963824080292546	bayes_pls_golite062009
substrate-specific channel activity	0.948079854416241	bayes_pls_golite062009
cadmium ion transmembrane transporter activity	0.661906409169955	bayes_pls_golite062009
active transmembrane transporter activity	0.490905558612378	bayes_pls_golite062009
iron ion transmembrane transporter activity	0.376948884172728	bayes_pls_golite062009
protein binding	0.0921963177320718	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..375]	PSI-BLAST	45.69897	No description for 2qfiA was found.

Protein Overview: MTPB_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: