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Protein Overview: gi|62319537, gi|...

General Information:
Name(s) found: gi|62319537 [NCBI NR]
gi|62318855 [NCBI NR]
gi|53850507 [NCBI NR]
gi|51970442 [NCBI NR]
gi|51970248 [NCBI NR]
gi|51970152 [NCBI NR]
gi|51969726 [NCBI NR]
gi|51536512 [NCBI NR]
gi|42566430 [NCBI NR]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • gi|62319537|dbj|BAD94965.1| translation initiation factor IF-2 like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|62318855|dbj|BAD93919.1| translation initiation factor IF-2 like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|53850507|gb|AAU95430.1| At4g11160 [Arabidopsis thaliana] [NCBI NR]
  • gi|51970442|dbj|BAD43913.1| putative translation initiation factor IF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|51970248|dbj|BAD43816.1| putative translation initiation factor IF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|51970152|dbj|BAD43768.1| putative translation initiation factor IF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|51969726|dbj|BAD43555.1| putative translation initiation factor IF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|51536512|gb|AAU05494.1| At4g11160 [Arabidopsis thaliana] [NCBI NR]
  • gi|42566430|ref|NP_192854.2| translation initiation factor IF-2, mitochondrial, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 743 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: translational initiation [IEA]
    Molecular Function: GTP binding [IEA]
    translation initiation factor activity [IEA][ISS]
    GTPase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS  60
   61 SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS HRERKKQTVK TKGKFSKREK 120
  121 KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET 180
  181 FSSEFDTISV DVAELLAMEI GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR 240
  241 NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA 300
  301 ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA 360
  361 VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV EARLDKGRGP LATIIVKAGT 420
  421 LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA 480
  481 RMLSEGRKRK YEKDRLLKAE EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA 540
  541 DALRTLNSPQ VSVNIVHSGV GAISHSDLDL AQACGACIVG FNVKGGSTGN LSAAQGSVKV 600
  601 FHHRVIYHLL EDIGNLIVEK APGVSEMEVS GEAEVLSIFK ILGKRRTEED GVNIAGCKVM 660
  661 DGRVCRSGLM RLLRSGEVVF EGSCASLKRE KQDVEQVGKG NECGLVFGDW NDFRVGDVIQ 720
  721 CMEPVIRKPK FISSESGAVR IEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 18.221849 Probable GTPase Der, N-terminal and middle domains; Probable GTPase Der, C-terminal domain
    2 View Details [215..743] PSI-BLAST 125.0 IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  2.41232228963167 bayes_pls_golite062009
  • binding
    		•  2.21604035604783 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.52921795164482 bayes_pls_golite062009
  • DNA binding
    		•  1.19966224604123 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.09075553688438 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.569910969126728 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.568840867400671 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.568779924702229 bayes_pls_golite062009
  • nucleotide binding
    		•  0.564275755355315 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.396187998943318 bayes_pls_golite062009
  • translation regulator activity
    		•  0.29096092258568 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.274994961137851 bayes_pls_golite062009
  • ATP binding
    		•  0.1860481660648 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.152859582615242 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.138615225841109 bayes_pls_golite062009
  • transcription factor activity
    		•  0.0612932659603008 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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