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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62319537, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS  60
   61 SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS HRERKKQTVK TKGKFSKREK 120
  121 KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET 180
  181 FSSEFDTISV DVAELLAMEI GINVRRQHST EGSEILPRPP VVTVMGHVDH GKTSLLDALR 240
  241 NTSVAAREAG GITQHVGAFV VGMPDSGTSI TFLDTPGHAA FSEMRARGAA VTDIVVLVVA 300
  301 ADDGVMPQTL EAIAHARSAN VPVVVAINKC DKPGANPEKV KYQLTSEGIE LEDIGGNVQA 360
  361 VEVSAAKSTG LDKLEEALLL QAVDMDLKAR VDGPAQAYVV EARLDKGRGP LATIIVKAGT 420
  421 LVRGQHVVIG CQWGRLRAIR DMIGKTTDRA TPAMPVEIEG LKGLPMAGDD VIVVESEERA 480
  481 RMLSEGRKRK YEKDRLLKAE EARLEEAAAR LETESEEGFV RVELPIVVKS DVQGTAQAVA 540
  541 DALRTLNSPQ VSVNIVHSGV GAISHSDLDL AQACGACIVG FNVKGGSTGN LSAAQGSVKV 600
  601 FHHRVIYHLL EDIGNLIVEK APGVSEMEVS GEAEVLSIFK ILGKRRTEED GVNIAGCKVM 660
  661 DGRVCRSGLM RLLRSGEVVF EGSCASLKRE KQDVEQVGKG NECGLVFGDW NDFRVGDVIQ 720
  721 CMEPVIRKPK FISSESGAVR IEC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle