| Protein: | gi|62319537, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 743 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62319537, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
564.0 | [0..20] | [731..168] |
|
Region A: Residues: [1-214] |
1 11 21 31 41 51
| | | | | |
1 MPSFLSSLFG LGIQASFRIG LVLPRVVAST ERQISSTVLK RASESVSFSF APYINGFGFS 60
61 SLSNWSRSYE SFPTETSIRY FHASRETLAK RKEDADRLLS HRERKKQTVK TKGKFSKREK 120
121 KTDKPPVEAP YVPPRLKRLA KGLPGKTVDI FEGMTLLELS KRTGESVAVL QSILINVGET 180
181 FSSEFDTISV DVAELLAMEI GINVRRQHST EGSE
|
| Detection Method: |  |
| Confidence: | 18.221849 |
| Match: | 1mkyA |
| Description: | Probable GTPase Der, N-terminal and middle domains; Probable GTPase Der, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 2.41232228963167 | bayes_pls_golite062009 |
| binding | 2.21604035604783 | bayes_pls_golite062009 |
| nucleic acid binding | 1.52921795164482 | bayes_pls_golite062009 |
| DNA binding | 1.19966224604123 | bayes_pls_golite062009 |
| transcription regulator activity | 1.09075553688438 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.569910969126728 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.568840867400671 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.568779924702229 | bayes_pls_golite062009 |
| nucleotide binding | 0.564275755355315 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.396187998943318 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
| transcription factor activity | 0.0612932659603008 | bayes_pls_golite062009 |
|
Region A: Residues: [215-743] |
1 11 21 31 41 51
| | | | | |
1 ILPRPPVVTV MGHVDHGKTS LLDALRNTSV AAREAGGITQ HVGAFVVGMP DSGTSITFLD 60
61 TPGHAAFSEM RARGAAVTDI VVLVVAADDG VMPQTLEAIA HARSANVPVV VAINKCDKPG 120
121 ANPEKVKYQL TSEGIELEDI GGNVQAVEVS AAKSTGLDKL EEALLLQAVD MDLKARVDGP 180
181 AQAYVVEARL DKGRGPLATI IVKAGTLVRG QHVVIGCQWG RLRAIRDMIG KTTDRATPAM 240
241 PVEIEGLKGL PMAGDDVIVV ESEERARMLS EGRKRKYEKD RLLKAEEARL EEAAARLETE 300
301 SEEGFVRVEL PIVVKSDVQG TAQAVADALR TLNSPQVSVN IVHSGVGAIS HSDLDLAQAC 360
361 GACIVGFNVK GGSTGNLSAA QGSVKVFHHR VIYHLLEDIG NLIVEKAPGV SEMEVSGEAE 420
421 VLSIFKILGK RRTEEDGVNI AGCKVMDGRV CRSGLMRLLR SGEVVFEGSC ASLKREKQDV 480
481 EQVGKGNECG LVFGDWNDFR VGDVIQCMEP VIRKPKFISS ESGAVRIEC
|
| Detection Method: | |
| Confidence: | 125.0 |
| Match: | 1zo1I |
| Description: | IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex |
Matching Structure (courtesy of the PDB): |
|
