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Protein Overview: MSH1_ARATH

General Information:
Name(s) found: MSH1_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana GN=MSH1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1118 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    Biological Process: mitochondrial DNA metabolic process [IMP]
    mismatch repair [ISS]
    mitochondrial genome maintenance [IMP]
    Molecular Function: ATP binding [IEA][ISS]
    catalytic activity [IEA]
    nuclease activity [IEA]
    mismatched DNA binding [IEA]
    damaged DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWIATRNAV VSFPKWRFFF RSSYRTYSSL KPSSPILLNR RYSEGISCLR DGKSLKRITT  60
   61 ASKKVKTSSD VLTDKDLSHL VWWKERLQTC KKPSTLQLIE RLMYTNLLGL DPSLRNGSLK 120
  121 DGNLNWEMLQ FKSRFPREVL LCRVGEFYEA IGIDACILVE YAGLNPFGGL RSDSIPKAGC 180
  181 PIMNLRQTLD DLTRNGYSVC IVEEVQGPTP ARSRKGRFIS GHAHPGSPYV YGLVGVDHDL 240
  241 DFPDPMPVVG ISRSARGYCM ISIFETMKAY SLDDGLTEEA LVTKLRTRRC HHLFLHASLR 300
  301 HNASGTCRWG EFGEGGLLWG ECSSRNFEWF EGDTLSELLS RVKDVYGLDD EVSFRNVNVP 360
  361 SKNRPRPLHL GTATQIGALP TEGIPCLLKV LLPSTCSGLP SLYVRDLLLN PPAYDIALKI 420
  421 QETCKLMSTV TCSIPEFTCV SSAKLVKLLE QREANYIEFC RIKNVLDDVL HMHRHAELVE 480
  481 ILKLLMDPTW VATGLKIDFD TFVNECHWAS DTIGEMISLD ENESHQNVSK CDNVPNEFFY 540
  541 DMESSWRGRV KGIHIEEEIT QVEKSAEALS LAVAEDFHPI ISRIKATTAS LGGPKGEIAY 600
  601 AREHESVWFK GKRFTPSIWA GTAGEDQIKQ LKPALDSKGK KVGEEWFTTP KVEIALVRYH 660
  661 EASENAKARV LELLRELSVK LQTKINVLVF ASMLLVISKA LFSHACEGRR RKWVFPTLVG 720
  721 FSLDEGAKPL DGASRMKLTG LSPYWFDVSS GTAVHNTVDM QSLFLLTGPN GGGKSSLLRS 780
  781 ICAAALLGIS GLMVPAESAC IPHFDSIMLH MKSYDSPVDG KSSFQVEMSE IRSIVSQATS 840
  841 RSLVLIDEIC RGTETAKGTC IAGSVVESLD TSGCLGIVST HLHGIFSLPL TAKNITYKAM 900
  901 GAENVEGQTK PTWKLTDGVC RESLAFETAK REGVPESVIQ RAEALYLSVY AKDASAEVVK 960
  961 PDQIITSSNN DQQIQKPVSS ERSLEKDLAK AIVKICGKKM IEPEAIECLS IGARELPPPS1020
 1021 TVGSSCVYVM RRPDKRLYIG QTDDLEGRIR AHRAKEGLQG SSFLYLMVQG KSMACQLETL1080
 1081 LINQLHEQGY SLANLADGKH RNFGTSSSLS TSDVVSIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] deduced N/A No confident structure predictions are available.
    2 View Details [118..949] PSI-BLAST 1000.0 DNA repair protein MutS, domain III; DNA repair protein MutS, the C-terminal domain; DNA repair protein MutS, domain II; DNA repair protein MutS, domain I
    3 View Details [950..1118] PSI-BLAST 5.0 Crystal Structure Analysis of ClpB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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