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Protein Overview: EG10913

General Information:
Name(s) found: rpsN / EG10913 [EcoGene]
Description(s) found:
Found 6 descriptions.
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  • 30S ribosomal subunit protein S14 / 30S ribosomal subunit protein S14 [EcoGene]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 101 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [IDALink to PubMed article]
    Biological Process: translation [IDALink to PubMed article][IEA]
    Molecular Function: structural constituent of ribosome [IDALink to PubMed article][IEA]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQSMKARE VKRVALADKY FAKRAELKAI ISDVNASDED RWNAVLKLQT LPRDSSPSRQ  60
   61 RNRCRQTGRP HGFLRKFGLS RIKVREAAMR GEIPGLKKAS W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 32.69897 No description for 1vs5N was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  6.46626105355287 bayes_pls_golite062009
  • structural molecule activity
    		•  5.9950507001335 bayes_pls_golite062009
  • binding
    		•  2.38688645545392 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.92713003801314 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.78943375122683 bayes_pls_golite062009
  • DNA binding
    		•  1.76229029583767 bayes_pls_golite062009
  • protein binding
    		•  1.60194768638501 bayes_pls_golite062009
  • transcription factor activity
    		•  1.15014535964426 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.99776558176649 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.36307842011603 bayes_pls_golite062009
  • transcription activator activity
    		•  0.30551145939731 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.2038327599988 bayes_pls_golite062009
  • ligand-dependent nuclear receptor activity
    		•  0.15407483499486 bayes_pls_golite062009
  • catalytic activity
    		•  0.101795606736461 bayes_pls_golite062009
  • transcription factor binding
    		•  0.0507779401401098 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle